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Name : lolD (Dshi_0748) Accession : YP_001532094.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Resistance Product : ABC transporter-like protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1136 EC number : 3.6.3.- Position : 756395 - 757078 bp Length : 684 bp Strand : + Note : Part of the ABC transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, lolA. Responsible for the formation of the lolA-lipoprotein complex in an ATP-de DNA sequence : ATGAGTGAGCCGGTGCTGGTCCTCGACGGGATCACCAAGACCTACAACGCAGGCACGCCGGGGGAGATCGCAGTGCTGCG CGGCGCGTCCCTGAGCGTGGCGCCGGGGGAGGTCGTGGCGCTCGTTGCGCCCTCGGGGTCGGGCAAGTCGACGCTCTTGC ATATCGCGGGGCTGCTGGATGTGCCGGATGCGGGGACGGTGACGCTGGCGGGTACGGCGGTCGCGGGTTTGCCGGACCGG ACGCGCACCGCGCTGCGCCGTCGCGAGGTGGGATTTATCTATCAATTTCATCATCTTCTGCCGGAATTCGATGCCGCCGA GAACGTGATCCTGCCGCAGCTTGCAGACGGGGTGCCGGAGGCCGACGCACGGGCACGGGCCGAGGGATTGCTGGCCTCCG TGGGCCTTGGCGCGCGGCTGACGCACCGTCCCGCGGCGCTGTCGGGGGGGGAGCAGCAGCGGGTCGCGTTCTGCCGCGCG CTGGCCAATGCACCCAAGGTTCTGCTGGCCGACGAGCCGACGGGGAACCTCGATCCCGCGACCTCGGACACGGTGTTCGA CGCGATGATGGCGCAGGTGCGGGAGACCGGGCTGAGTGCGGTGATCGCGACCCACAACATGGCGCTGGCGGGCCGGATGG ACCGGGTGGTGCGGATGGAAAACGGGGTCCTGTCGGAGGGCTAG Protein sequence : MSEPVLVLDGITKTYNAGTPGEIAVLRGASLSVAPGEVVALVAPSGSGKSTLLHIAGLLDVPDAGTVTLAGTAVAGLPDR TRTALRRREVGFIYQFHHLLPEFDAAENVILPQLADGVPEADARARAEGLLASVGLGARLTHRPAALSGGEQQRVAFCRA LANAPKVLLADEPTGNLDPATSDTVFDAMMAQVRETGLSAVIATHNMALAGRMDRVVRMENGVLSEG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| Cp1002_1464 | YP_005681730.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 5e-24 | 42 |
| CpC231_1466 | YP_005683828.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-25 | 42 |
| cpfrc_01473 | YP_003783873.1 | hypothetical protein | Not tested | PiCp 5 | Protein | 2e-25 | 42 |
| CpI19_1473 | YP_005685914.1 | ABC transporter ATP-binding protein | Not tested | PiCp 5 | Protein | 2e-25 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| lolD | YP_001532094.1 | ABC transporter-like protein | NC_008702.1.4606598. | Protein | 1e-28 | 43 |
| lolD | YP_001532094.1 | ABC transporter-like protein | CP001581.1.gene798.p | Protein | 2e-31 | 41 |
