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Name : oppDF (Dshi_0658) Accession : YP_001532005.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : ABC peptide transporter Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 661169 - 662770 bp Length : 1602 bp Strand : + Note : PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; NCBI conserved domains: cd03257, ABC_NikE_OppD_transporters; high swissprot hit to Uncharacterized ABC transporter ATP-binding protein yejF from Escherichia coli K12; hi DNA sequence : ATGAGCGATGCGGTTCTGCAGGTGCGCAACCTGCGCGTGGGATTCCGGCAGGACGGGCAGGTGACCGAGGCCGTGAAGGG CGTGAGCTTCGACGTGGCCCAGGGCGAGACCGTGGCCCTAGTGGGCGAGAGCGGGTCGGGAAAGTCGGTGACCGCGCTCA GCACCGTGTCGCTCCTGCCGGATTCGGCGGAGGTGTCGGGATCCATCACCTATGCCGGGACCGAGATGGTCGGCGCGCCG GAGCGGGACTTGCGCCGGGTGCGCGGCAACGATGTCAGCTTCATCTTCCAGGAGCCGATGACCTCGCTCAACCCGCTGCA CCCTCTGGAGAAGCAGATCACCGAGAGCCTGACGCTCCATCAGGGGCTGACCGGCGACGCGGCCCGGGCGCGGGTGATCG AGTTGCTGGAAAAGGTCGGGATCCGCGATGCCGAAAGCCGGTTGGGGGCGTATCCGCACCAGCTCTCCGGTGGGCAGCGC CAGCGGGTGATGATCGCCATGGCGCTGGCCAACGGGCCGGATTTGCTGATCGCGGACGAGCCGACCACGGCGCTCGACGT GACGATCCAGGCGCAGATCCTCGATCTGCTGGCGGATCTGAAAGAGGCAGAGGGGATGAGCCTTCTGTTCATCACCCATG ACCTGACCATCGTGCGGCGGATCGCGGACCGGGTCTGCGTGATGCAGGGCGGCGAGATCGTCGAGACCGGCCCCACGGCG GAGATCTTCGCCAACCCGCAGCATCCCTATACCCGCAAGCTACTGGCGGCGGAGCCGTCGGGCCAGCCCGACCCGGTGCC CGAGGACGCGCCCGTGGTGGCCGAGACCGACAGCCTGAAGGTGTGGTTTCCGATCCAGCGCGGCATCCTGCGGCGCACGG TCGGCCATGTGAAGGCGGTCAACAACGCGACGCTGAACGTGCGCGCGGGCGAGACCCTGGGCGTGGTCGGCGAGAGCGGG TCGGGCAAGACCACGCTGGCGCTCGCCATCCTGCGGCTGATCTCGTCGGAGGGGCGGATCGTCTATGCGGGCGAGAACAT CCAGGGCTGGAAATCCCGCGACCTGCGCCGGTTGCGCAAGGACATGCAGGTGGTGTTCCAGGACCCTTACGGGAGCCTCA GCCCGCGCATGACCATCGCCCAGATCATCGCCGAGGGGCTGGGGGTGCACGGGCTGGAGCCGGGGGCCGACCCGCGCCGG ATGGTGGCGGAGATCCTGGTGGAAGTGGGCCTCGACCCGGCCATGATGGACCGCTATCCGCACGAGTTTTCCGGCGGGCA GCGGCAGCGGATCGCGATTGCGCGCGCCATGATCCTGCGGCCCAAGCTGGTGGTTCTGGACGAGCCGACCTCGGCGCTCG ACATGACGGTGCAGGTCCAGATCGTGGAGCTTCTGCGCGCGTTGCAGCGGAAATACGGGCTGGCCTATATCTTCATCTCT CACGACCTGAAGGTGGTGCGCGCGCTGAGCCACAAGGTGATCGTGATGCGCCAGGGTGACGTGGTGGAGATGGGCGAGGG CCGGCAGATCTTCGAGCGGCCCCGGTCGGACTATACCAAGCAGTTGCTGGCGGCGGCGTTCATGGATCGTGGTGCGGCCT GA Protein sequence : MSDAVLQVRNLRVGFRQDGQVTEAVKGVSFDVAQGETVALVGESGSGKSVTALSTVSLLPDSAEVSGSITYAGTEMVGAP ERDLRRVRGNDVSFIFQEPMTSLNPLHPLEKQITESLTLHQGLTGDAARARVIELLEKVGIRDAESRLGAYPHQLSGGQR QRVMIAMALANGPDLLIADEPTTALDVTIQAQILDLLADLKEAEGMSLLFITHDLTIVRRIADRVCVMQGGEIVETGPTA EIFANPQHPYTRKLLAAEPSGQPDPVPEDAPVVAETDSLKVWFPIQRGILRRTVGHVKAVNNATLNVRAGETLGVVGESG SGKTTLALAILRLISSEGRIVYAGENIQGWKSRDLRRLRKDMQVVFQDPYGSLSPRMTIAQIIAEGLGVHGLEPGADPRR MVAEILVEVGLDPAMMDRYPHEFSGGQRQRIAIARAMILRPKLVVLDEPTSALDMTVQVQIVELLRALQRKYGLAYIFIS HDLKVVRALSHKVIVMRQGDVVEMGEGRQIFERPRSDYTKQLLAAAFMDRGAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-87 | 44 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-87 | 44 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-87 | 44 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-87 | 44 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-101 | 42 |
