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Name : Dshi_0464 (Dshi_0464) Accession : YP_001531813.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 449446 - 450267 bp Length : 822 bp Strand : + Note : PFAM: Integrase catalytic region KEGG: rde:RD1_3449 integrase, catalytic domain, putative; good swissprot hit to Insertion element IS476 uncharacterized 39.2 kDa protein from Xanthomonas euvesicatoria and high Ref YP hit to integrase, catalytic domain, pu DNA sequence : GTGGACTGGGCCATGAAGACAAAAGGCTACAATCAGCGCCGGGCGTGCGCGCTGGCGGGGATCGATCCGCGTGTGTATCG GCGTCGGTCGAAGCGCCTTGCCGACACGGAACTGCGGGTGAGGATGAAAGAACTGGCGTCCGAGCGGCGTCGGTTCGGTT ATCGCCGCCTGCACATGCTGCTGAAGCGTGAGGGCTGGGAGGTAAACTGGAAGAAACTGTACCGGCTCTACCGCGACGAA GGGTTAACCGTTCGTAAACGGGGCGGACGCAAGCGCGCAGTGGGCACCAGGACGCCCATGGCGATCCCGCAGGGGCCAAA CCAGAGGTGGTCCCTCGACTTCATGTCGGATGCGCTGGAAGACGGGCGTCGGTTCAGGGTGCTAAACGTGATTGATGACT TTAGCCGGGAATGTCTGGCCGCTGTGGTCGATACATCCATCAGCGGCGCACGTGTCGCCCGCGAGTTGGATCGGATCGCC GAGCTGCGTGGGTACCCCTGCCTTGTGGTCAGCGACAATGGAACCGAACTGACAAGCAACGCGATGCTGAAATGGCAGGA AGACCGTAAAGTCGACTGGCACTACATCGCGCCCGGAAAGCCCATGCAGAATGGCCTCGTCGAAAGCTTCAACGGGAGGA TGCGAGAGGAATGCCTGAACGAACACCTGTTCCCGTCACTGCGCCATGCCTGCCGCATGATTGCGGCATGGCGCGACGAC TACAACCACCACCGCCCGCACTCGAGTCTCGACGGGCTCACCCCGCGGGAGTATCACCAACGGTCAAGAGAGGACCAAAC CCTGAACAGAGCTAACCTATAA Protein sequence : MDWAMKTKGYNQRRACALAGIDPRVYRRRSKRLADTELRVRMKELASERRRFGYRRLHMLLKREGWEVNWKKLYRLYRDE GLTVRKRGGRKRAVGTRTPMAIPQGPNQRWSLDFMSDALEDGRRFRVLNVIDDFSRECLAAVVDTSISGARVARELDRIA ELRGYPCLVVSDNGTELTSNAMLKWQEDRKVDWHYIAPGKPMQNGLVESFNGRMREECLNEHLFPSLRHACRMIAAWRDD YNHHRPHSSLDGLTPREYHQRSREDQTLNRANL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 9e-55 | 49 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 4e-40 | 48 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 4e-31 | 45 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 2e-37 | 43 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 2e-37 | 41 |
