Gene Information

Name : arcB (Dshi_0433)
Accession : YP_001531782.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : ornithine carbamoyltransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0078
EC number : 2.1.3.3
Position : 424920 - 425921 bp
Length : 1002 bp
Strand : +
Note : TIGRFAM: ornithine carbamoyltransferase PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain KEGG: mes:Meso_2240 ornithine carbamoyltransferase; high swissprot hit to Or

DNA sequence : 
ATGGCTTTCAACCTCAAGAACCGGCATTTCCTGACCCTGCGGGGTTTCACGCCCGAGGAAATCGGATTTCTGCTGAAACT
GTCCGCGGATCTGAAATCGGCGAAATACGCGGGCACCGAGGTGCCGACCCTGCGGGGCAAGGAAATCGCGCTGATCTTCG
AGAAGGACAGCACCCGCACCCGGGTGGGTTTCGAGGTGGCCGCCCATGATCAGGGCGCGACCGTCACCTATCTGGGGCCG
TCGGGCACCCATCTGGGCAAGAAGGAAACCGTCAAGGACACCGCCCGTGTGCTGGGCCGGGTGTATGACGCGATCGAGTA
TCGCGGTTTCGGCCAGGAGATCGTGCAGGAGCTGGCCGACTGGGCCGGTGTGCCGGTCTATAACGGGCTGACGGACGAGT
TTCACCCGACGCAGATCCTCGCCGATTTCCTGACCATGCAGGAGCATTGCGAAAAGCCCCTGCGCGAGGTGGCCTATTGT
TTCATGGGCGACGCGGGCAACAACATGGGTGACAGCCTTCTGATCGGTGGGGCCAAGATGGGCATGGACGTGCGCCTTTG
CGCGCCGCGAAGCCTGTGGCCGGTGCAGTCCATTCAGGACGAGGCGCGGGCGATCGCTGAGCATACGGGCGCGCGCGTCA
CGCTGACCGAGGATGTCGACAAGGCCGTCAAGGGCGTCGATTTCGTCTATACCGATGTCTGGGTGTCGATGGGCGAGCCA
GTGGAAAAATGGGCCGAGCGGATCGATCTGTTGATGCCGTACCAGGTCAACGCGGATGTGATGGCCCGGACGGGCAATCC
GCGGGTGCGGTTCATGCATTGCCTGCCGGCTTTCCACAACGCCGAGACCGAGGTCGGCTGCGACATTCAAGACAAGTTCG
GGCTGGAGGCGATGGAGGTCACCGAGGAGGTGTTCGAAAGCCCCGCCTCGATCGTCTTCGACCAAGCGGAGAACCGGATG
CACACGATCAAGGCGGTTCTTGTCGCCACGTTGGGGGGCTGA

Protein sequence : 
MAFNLKNRHFLTLRGFTPEEIGFLLKLSADLKSAKYAGTEVPTLRGKEIALIFEKDSTRTRVGFEVAAHDQGATVTYLGP
SGTHLGKKETVKDTARVLGRVYDAIEYRGFGQEIVQELADWAGVPVYNGLTDEFHPTQILADFLTMQEHCEKPLREVAYC
FMGDAGNNMGDSLLIGGAKMGMDVRLCAPRSLWPVQSIQDEARAIAEHTGARVTLTEDVDKAVKGVDFVYTDVWVSMGEP
VEKWAERIDLLMPYQVNADVMARTGNPRVRFMHCLPAFHNAETEVGCDIQDKFGLEAMEVTEEVFESPASIVFDQAENRM
HTIKAVLVATLGG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
argF NP_371693.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 61
argF NP_374285.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 5e-91 61
arcB1 YP_186044.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-91 61
argF YP_493760.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 3e-91 61
SAKOR_01090 YP_008491278.1 Ornithine carbamoyltransferase Not tested vSa¥ã Protein 4e-91 61
argF NP_645867.1 ornithine carbamoyltransferase Not tested vSa¥ã Protein 6e-91 60
SE0103 NP_763658.1 ornithine carbamoyltransferase Not tested SCCpbp4 Protein 2e-88 59