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Name : Dshi_0404 (Dshi_0404) Accession : YP_001531754.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 398279 - 399088 bp Length : 810 bp Strand : + Note : PFAM: Integrase catalytic region KEGG: bbt:BBta_7691 integrase, catalytic domain; good swissprot hit toInsertion element IS476 uncharacterized 39.2 kDa protein from Xanthomonas euvesicatoria; high Ref Yp hit to Integrase catalytic region from Xanthobacter DNA sequence : GTGGCACACGTTGTGGAAGTCCACGGAGTGAGCCAGCGACGGGCGGGCAAGGCACTGGCCGTGGATCGGTCGAGCGTGCG CTATCGCAGCGTGCGGCCTGACGATGCCGAAGCGAGGGCCGCCATGAAGGCTGTCGCGGCCGAGAGGCGGCGGTTTGGCT ATCGCCGCATCCACGTGATGCTGGAACGGCAGGGGATCATGATGAACCTGAAGAAGCTCAGGCGGCTCTATCGCGAGGAG AAGCTCCAAGTGCGCCGCCGGGGCGGCCGAAAGCGGGCTCTGGGGACACGCTGGCCGATGCTGGTGCCAGATGCCCCCAA CCAGCACTGGAGCCTGGACTTCGTCAGCGATGCGCTGACGGATGGCAGACAGTTCCGCGTTCTGGCCGTGGTCGACGACT ACAGCCGGGAGTGCCTGGCCTTGGTGGCGGACACGTCGCTCTCTGGCCTGCGCGTCGTGCGCGAGCTCGATGCGTTGATG TTGCGCCGCGGCCAGCCTGCAATGGTGGTTTCGGACAATGGAACGGAACTGACCTCGGTGGCTGTCCTGAGCTGGTGCCA GCGCACGGGCATCGAATGGCACTACATCGCGCCAGGAAAGCCCATGCAGAATGGCTTCGTCGAAAGCTTCAACGGACGCT TCCGGGACGAGCTTCTCAACGAGTCGCTATTCTCGTCTCTGGCCGATGCCCGCGAGCAGATCCGGGCATGGCAGCACGAC TACAACCACCATCGCCCTCACTCAGGACTGGGGAACATTCCGCCCGTCGAGTTCGTGGCAAAGAAGGGGCTGGAAATGCG CGCCGCGTAG Protein sequence : MAHVVEVHGVSQRRAGKALAVDRSSVRYRSVRPDDAEARAAMKAVAAERRRFGYRRIHVMLERQGIMMNLKKLRRLYREE KLQVRRRGGRKRALGTRWPMLVPDAPNQHWSLDFVSDALTDGRQFRVLAVVDDYSRECLALVADTSLSGLRVVRELDALM LRRGQPAMVVSDNGTELTSVAVLSWCQRTGIEWHYIAPGKPMQNGFVESFNGRFRDELLNESLFSSLADAREQIRAWQHD YNHHRPHSGLGNIPPVEFVAKKGLEMRAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 4e-44 | 49 |
| unnamed | ABR13352.1 | insertion sequence IS407 OrfB | Not tested | PAGI-5 | Protein | 1e-37 | 48 |
| EXB25 | ABD94712.1 | hypothetical protein | Not tested | ExoU island B | Protein | 2e-27 | 45 |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 4e-37 | 43 |
