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Name : yrbH (Dshi_3588) Accession : YP_001534922.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Virulence Product : arabinose-5-phosphate isomerase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0794 EC number : 5.3.1.13 Position : 3778031 - 3778993 bp Length : 963 bp Strand : - Note : KEGG: rde:RD1_0368 arabinose 5-phosphate isomerase TIGRFAM: KpsF/GutQ family protein PFAM: CBS domain containing protein; sugar isomerase (SIS) DNA sequence : ATGAGCACCGACACCTTTCTCGACATCGCCCGCCGGGTCATCGCGGTGGAGGCCGAGGGCCTTGCGCAGCTGGCCGCCGG GCTCGACGACAGTTTCGCCCGCGCGGTCGATACGATCCTGAGCGCCAAGGGCCGGGTGATCGTGTCGGGCATGGGCAAAT CGGGCCACATCGCGCGCAAGATGGCGGCGACTTTCGCGTCGACCGGGACGCCTGCGCATTTCGTCCACCCCGCCGAGGCG AGCCATGGCGATCTGGGAATGATGGCGGCGGGCGACGTGGTACTGGTGCTGTCGAACTCAGGCGAGACGCCGGAGCTCGC GGATCTCGTGGCCTACACGCGGCGGTTCCGCATTCCGTTGATCGGGGTGGCGAGCAATCCCGACAGCACGCTGTTGCGCC AGTCCGACGTGGCGCTGGTGCTGCCGAAGGCGCCGGAGGCCTGCGGGACCGGCATCGTGCCCACCACCTCGACCACCATG ACCCTGGCCTTGGGCGATGCCCTGGCGGTGGCCCTGATGGAGCATCGCGAGTTCAGCCCCCAGAATTTCCGCGACTTCCA CCCCGGCGGCAAGCTGGGCGCGCGGCTGTCCAAGGTCGGGGATCTGATGCACAGGGGCACAGAGCTGCCCCTGATCGCCG AAGACGCCGCCATGGGCGACGCCCTGCTGGAGATCAGCCAGAAGGGCTTCGGCGTGGTCGGGGTGACCCGGGACGGGCTG CTGACGGGCGTGATCACCGACGGGGATTTGCGGCGGCACATGGACGGGCTGCTGGGGCTCGCGGCGGGCGACGTGATGAC CCGCGATCCCCTGACCATCACCCCCGACGCCCTGGCCGAAGAAGCCGTGGCGGTGATGAACGCGCGCAAGATCACCTGTC TGTTCGTGGTGCCTGAGGACGGGCCGAAGGCGCCTGCCGGGTTCCTGCATATTCATGACTGTCTGCGGGCCGGGATCGGC TGA Protein sequence : MSTDTFLDIARRVIAVEAEGLAQLAAGLDDSFARAVDTILSAKGRVIVSGMGKSGHIARKMAATFASTGTPAHFVHPAEA SHGDLGMMAAGDVVLVLSNSGETPELADLVAYTRRFRIPLIGVASNPDSTLLRQSDVALVLPKAPEACGTGIVPTTSTTM TLALGDALAVALMEHREFSPQNFRDFHPGGKLGARLSKVGDLMHRGTELPLIAEDAAMGDALLEISQKGFGVVGVTRDGL LTGVITDGDLRRHMDGLLGLAAGDVMTRDPLTITPDALAEEAVAVMNARKITCLFVVPEDGPKAPAGFLHIHDCLRAGIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| kpsF | AAZ04466.1 | polysialic capsule transport protein | Virulence | PAI I APEC-O1 | Protein | 3e-50 | 45 |
| kpsF | CAE85210.1 | KpsF protein | Virulence | PAI V 536 | Protein | 2e-50 | 45 |
| kpsF | YP_854329.1 | polysialic acid capsule synthesis protein KpsF | Not tested | PAI I APEC-O1 | Protein | 4e-50 | 45 |
