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Name : hslU (Dshi_3441) Accession : YP_001534775.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : 3.4.25.- Position : 3624650 - 3625963 bp Length : 1314 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : GTGACCGACCTGACCCCCCGCGAAATCGTGTCCGAACTGGATCGGTTCATCATCGGGCAGAAGGATGCCAAACGGGCTGT GGCCGTTGCCCTGCGCAACCGCTGGCGCCGCAAACAGCTGTCGGATGACCTGCGCGAAGAGGTTTATCCCAAGAATATCC TGATGATCGGCCCGACCGGCGTCGGCAAGACCGAGATCAGCCGTCGCTTGGCGAAACTGGCACGCGCGCCGTTCATCAAG GTCGAAGCCACCAAGTTCACCGAAGTCGGCTATGTCGGCCGTGACGTGGAACAGATCATCCGCGACCTCGTCGAGAACGC CATCACCATGACTCGCGATCACATGCGCGAAGAGGTGAAGGCCAACGCCCATCAGGCCGCTGAAGAGCGTGTGATCGAAG CCATCGCGGGTTCAGACGCCCGTGAAGCCACCCGCGAGATGTTCCGCAAGAAGCTGAAAGCCGGGGAACTGGACGATACG GTGATCGAGCTGGAGGTGGCAGATACTTCCAACCCGATGAGCATGTTCGAAATTCCCGGCCAGCCCGGCATGAACCCCAT GGGCGGCGGCATGGATCTGGTTGAGCTGTTCGGCAAGGCGTTTGGTGGGCGCACCGTGCGCAAGAAGCTGACTGTGGCAC AGAGCTACGAGGTCTTGATCAGCGAAGAGGCAGACAAACTGCTGGACGATGAAGCGGTCAATCGCAGTGCCGTCACAGCG GTGGAACAGAACGGCATTGTCTTCCTCGACGAGATCGACAAGGTCTGCGCTCGCTCCGACGCCCGTGGCGCCGATGTCAG CCGCGAAGGCGTACAGCGTGACCTGTTGCCCCTGATCGAGGGCACAACCGTCAGCACGAAGTACGGCCCAGTGAAAACCG ATCATGTGCTGTTCATCGCCTCCGGCGCGTTCCACATCGCCAAACCTTCGGACCTGCTGCCGGAACTTCAGGGGCGCCTG CCCATCCGGGTCGAGTTGCGCCCCCTGACCGAACAGGATTTCGTCCGTATCCTGACCGAGACCGACAATGCTCTGACACT GCAATACACCGCGCTGATGGGCACGGAATCCGTCACTGTCACCTTCGCCGAGGATGGCATCGCAGCGCTTGCGCGCATCG CAGCGGAGGTGAACCAATCGGTGGAGAACATCGGCGCGCGGCGGCTCTATACAGTGATGGAACGGGTGTTCGAGGAACTC AGCTTCGCCGCTCCGGACCGCTCCGGCGACGAGATCACCGTGGATGCGGAGTTTGTCGAAGCCAATCTCGGCGCGCTGAC CCGCGATACCGATCTCAGCCGCTACGTACTCTGA Protein sequence : MTDLTPREIVSELDRFIIGQKDAKRAVAVALRNRWRRKQLSDDLREEVYPKNILMIGPTGVGKTEISRRLAKLARAPFIK VEATKFTEVGYVGRDVEQIIRDLVENAITMTRDHMREEVKANAHQAAEERVIEAIAGSDAREATREMFRKKLKAGELDDT VIELEVADTSNPMSMFEIPGQPGMNPMGGGMDLVELFGKAFGGRTVRKKLTVAQSYEVLISEEADKLLDDEAVNRSAVTA VEQNGIVFLDEIDKVCARSDARGADVSREGVQRDLLPLIEGTTVSTKYGPVKTDHVLFIASGAFHIAKPSDLLPELQGRL PIRVELRPLTEQDFVRILTETDNALTLQYTALMGTESVTVTFAEDGIAALARIAAEVNQSVENIGARRLYTVMERVFEEL SFAAPDRSGDEITVDAEFVEANLGALTRDTDLSRYVL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 8e-94 | 46 |
