Gene Information

Name : fliP (Dshi_3267)
Accession : YP_001534601.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Virulence
Product : flagellar biosynthesis protein FliP
Function : -
COG functional category : N : Cell motility
COG ID : COG1338
EC number : -
Position : 3431930 - 3432658 bp
Length : 729 bp
Strand : +
Note : FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus

DNA sequence : 
ATGCGGCTGGCCCTCGCCTTCGCGCTTCTGGCGCTGTTTGCCGGCAGTGCGGGTGCGCAGGAGCTGGCCATCAATCTCGG
CGACGAGACCTCGCTCTCGGCGCGCACCTTCCAGATCATCGCCCTGATCACGGTGCTCAGCATCGCGCCGGGTCTGGCGA
TCATGATCACCTGCTTTCCGTTCATGGTGACGGTCCTGTCGATCCTGCGCCAGGGGATTGGGTTGCAGCAATCGCCGCCC
AACATGCTGATCATCAGCCTGGCGCTGTTCCTGACCTATTTCGTGATGGACCCGGTGTTCCGCGAAGCCTGGAGCAGGGG
CATTCAGCCCATGGTGGACGGGGCGGTGGACATGGAGGAAGGGTTCCGGGCTGCGCTCGAGCCGTTCATTCGCTTCATGC
AGGCGCGGACCGACCCGGAAACGCTCGCAAGACTCGGCAATCTGCGGATGGAGACCGCGGGGGTCGCGCCCTTCGAGCTG
GACGCGCCGCCGATCTCGGTGCTGATCCCCTCCTTCCTGCTGAGCGAGATCGAGAAGGCGTTCCAGATCGGTTTCTTGAT
CTTCCTGCCCTTCCTGATCATCGACCTGATCGTCGCGGCGATCCTGATGTCCATGGGCATGATGATGGTGCCGCCCGCGA
TCGTGTCGCTGCCCTTCAAGCTGGCGTTCTTCGTGGTCGCCGATGGTTGGACGCTTCTGTCGGAGGCTTTGCTGCGCAGT
TACATGTGA

Protein sequence : 
MRLALAFALLALFAGSAGAQELAINLGDETSLSARTFQIIALITVLSIAPGLAIMITCFPFMVTVLSILRQGIGLQQSPP
NMLIISLALFLTYFVMDPVFREAWSRGIQPMVDGAVDMEEGFRAALEPFIRFMQARTDPETLARLGNLRMETAGVAPFEL
DAPPISVLIPSFLLSEIEKAFQIGFLIFLPFLIIDLIVAAILMSMGMMMVPPAIVSLPFKLAFFVVADGWTLLSEALLRS
YM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hrcR AAT96262.1 HrcR Virulence S-PAI Protein 2e-17 41
hrcR AAT96303.1 HrcR Virulence S-PAI Protein 2e-17 41
hrcR AAT96343.1 HrcR Virulence S-PAI Protein 2e-17 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fliP YP_001534601.1 flagellar biosynthesis protein FliP VFG2016 Protein 1e-29 46
fliP YP_001534601.1 flagellar biosynthesis protein FliP VFG2494 Protein 8e-30 45
fliP YP_001534601.1 flagellar biosynthesis protein FliP VFG2338 Protein 7e-26 44
fliP YP_001534601.1 flagellar biosynthesis protein FliP VFG1259 Protein 2e-28 44