Gene Information

Name : argH (Dshi_3062)
Accession : YP_001534396.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : argininosuccinate lyase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0165
EC number : 4.3.2.1
Position : 3230659 - 3232050 bp
Length : 1392 bp
Strand : -
Note : catalyzes the formation of arginine from (N-L-arginino)succinate

DNA sequence :
ATGTCCGACACCAAATCCAACGCCATGTGGGGCGGCCGCTTCGCCGCCGGGCCGGACGCGATCATGGAGGCGATCAATGC
CTCGATCGGGTTCGACCGGCGCCTGGCGCGGCAGGATATCGACGGCTCCCGCGCCCATGCGGCCATGCTCGCACAGCAAG
GCATCCTTTCCAGTAAAGACGCCGAGGCGATCCGGGAAGGCCTGCTCACGGTCTTGTCAGAGATCGAAACAGGGCAGTTC
GCCTTTTCGGCGGCGCTGGAGGACATCCACATGAACGTGGAAGCCCGCCTGAAAGAGCTGATCGGGGAACCCGCGGGCCG
TCTGCACACGGGCCGGTCGCGCAACGACCAGGTGGCGACGGATTTCAAGCTCTGGGTGCGCGACCAGCTCGACGCGGCGG
ATGCGGGGCTCCTCGCGCTCTTGCGCGCGCTCCTCGCCCAGGCAGAGGCCGGGGCCGACTGGGTCATGCCAGGCTTTACC
CACCTGCAGACCGCGCAGCCGGTGACCTGGGGCCACCACATGATGGCCTATGTCGAGATGTTCGCCCGCGACCGCGGCCG
GATGCAGGACGCCCGCGCCCGGATGAACGAATGCCCCCTCGGCGCCGCGGCGCTGGCGGGCACGTCCTTTCCGCTCGACC
GCGACGCGACCGCGCAGGCGCTGGGCTTCGATCGCCCGGCGGCCAATTCGCTCGACGCGGTGTCGGACCGGGACTTCGCG
CTGGAATTCCTCGCCGCCGCCAGCATTTGCGCGATGCATCTCAGCCGCATGGCCGAGGAGCTGGTGATCTGGTCCTCGGC
GCAATTCCGCTTCGTCACCCTGTCGGACCGGTTCTCCACCGGCTCGTCGATCATGCCGCAGAAGAAGAACCCGGATGCCG
CCGAGCTGATCCGCGCCAAGATCGGCCGGATCGTCGGGGCCAATGTGGCGCTGCTGACGGTGATGAAGGGGCTGCCGCTG
GCCTATTCCAAGGACATGCAGGAGGACAAGGAACAGGTCTTCGATGCCGCCGACACGCTGATGCTGGCGCTCGCGGCGAT
GGAAGGCATGGTCCGCGACATGACCGCGAACCGCGCCAGCCTCGAGGACGCGGCGGCCAGCGGCTTCTCCACCGCGACGG
ATCTCGCCGACTGGCTGGTGCGGGAGTTGAACTTGCCTTTCCGCGATGCACATCATGTCACGGGCACGCTGGTGGCCATG
GCCGAAGCGAAGGGCTGCGACCTGCCGGACCTGAGCCTGGCGGAGATGCAATCGGTCCATGGCGCGATCCGGGCCGATGT
GTTCGAGGTGCTGGGGGTCCATAACTCGGTCGCCAGCCGGACAAGCTACGGCGGCACGGCCCCGAGCCAAGTGCGCGCGC
AGGTTGCGCGCTGGAAGGAGAGACTGGGATGA

Protein sequence :
MSDTKSNAMWGGRFAAGPDAIMEAINASIGFDRRLARQDIDGSRAHAAMLAQQGILSSKDAEAIREGLLTVLSEIETGQF
AFSAALEDIHMNVEARLKELIGEPAGRLHTGRSRNDQVATDFKLWVRDQLDAADAGLLALLRALLAQAEAGADWVMPGFT
HLQTAQPVTWGHHMMAYVEMFARDRGRMQDARARMNECPLGAAALAGTSFPLDRDATAQALGFDRPAANSLDAVSDRDFA
LEFLAAASICAMHLSRMAEELVIWSSAQFRFVTLSDRFSTGSSIMPQKKNPDAAELIRAKIGRIVGANVALLTVMKGLPL
AYSKDMQEDKEQVFDAADTLMLALAAMEGMVRDMTANRASLEDAAASGFSTATDLADWLVRELNLPFRDAHHVTGTLVAM
AEAKGCDLPDLSLAEMQSVHGAIRADVFEVLGVHNSVASRTSYGGTAPSQVRAQVARWKERLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00324 YP_008207789.1 Argininosuccinate lyase Not tested AbaR25 Protein 2e-103 54
BJAB0868_00328 YP_008211654.1 Argininosuccinate lyase Not tested AbaR26 Protein 2e-103 54