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Name : lpd (Dshi_2886) Accession : YP_001534220.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : dihydrolipoyl dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 3041719 - 3043113 bp Length : 1395 bp Strand : + Note : SWISSPROT P14218: Dihydrolipoyl dehydrogenase; TIGRFAM: TIGR01350 dihydrolipoamide dehydrogenase; COG: COG1249 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes; PFAM: PF00070, PF02852, PF0 DNA sequence : ATGGCAAGCTATGACGTTATCATCATCGGCTCCGGCCCCGGCGGCTATGTCGGCGCGATCCGCTGCGCGCAGCTGGGCCT CAAGACTGCCTGCGTGGAAGGGCGCGACACCCTGGGCGGCACCTGCCTGAACGTGGGCTGCATCCCGTCCAAGGCGCTGC TCCATGCTTCCCACCAAGTCCACGAGGCCGAGCACAACTTCGAGAAGATGGGCATCAAGGTGCCCGCGCCGAAAATCGAC TGGAAAACCATGCTGGCCTACAAGGACGACGTGATCGGCCAGAACACCAAGGGCATCGAGTTCCTGTTCAAGAAGAACAA GGTCGACTGGCTGAAGGGCTGGGCCTCGATCCCCGAGGCGGGCAAGGTCAAGGTTGGCGACGAGACCCACGAGGCCAAGC ACATCATCATTGCGTCTGGCTCCGAGCCTGCCTCGATCCCCGGCGCGGAGGTCGAGATCGACGAAAAGGTCGTCGTTACC TCCACCGGCGCGCTGGAGTTGGGCAAGATCCCCAAGCGCATGGTCGTGGTCGGCGGCGGCGTGATCGGGCTGGAGCTTGG CTCGGTCTATGCGCGGCTCGGCACCGAGGTCTCGGTGATCGAGTTCATGGACGGGATCACCCCGGGCCAGGACCTCGAGG TTGCCCGCCAGTTCCAGAAGATCCTCACCAAGCAGGGGCTGAAATTCATCACCGGCGCTGCAGTGCAGAAAGTGGCCGCG ACCAAGAGCAAGGCCAAGGTCACCTACAAGATGCGCAAGGATGACAGCGAGGATAGCCTTGAAGCAGACATCGTGCTCGT CTCCACCGGGCGTAAACCGTTCACCGAGGGGCTCGGGCTCGACGCCCTGGGGGTGAAGATGACCGAACGGGGGCAGATCG CCACCGACGGCAGCTACCGCACGAATGTGCCCGGGGTCTATGCGATCGGAGACGTGATCGAGGGGCCGATGCTGGCCCAC AAGGCCGAGGACGAGGGCATGGCCGTGGCCGAGATGATCGCCGGGCAGCACCCCCATGTGAATTACGGCGTGATCCCCGG GGTGATCTACACCCATCCCGAGGTCGCCAGCGTCGGCAAGACCGAGGAACAACTCAAGGCCGAGGGCGTCGCCTACAAGG TGGGCAAGTTCTCCTTCATGGGCAACGGTCGGGCGAAGGCCAATTTCGCCGCCGACGGGTTCGTCAAGCTGCTGGCAGAC AAGGCAACCGACCGGATCCTCGGCGCCCATGTGATCGGCCCCATGGCGGGCGACCTGATCCACGAGGTCTGCGTCGCGAT GGAATTCGGGGCGGCGGCCGAGGACCTGGCCCGCACCTGCCACGCGCACCCGACCTATTCCGAGGCCATGCGCGAAGCGG CCCTGGCCTGCGGCGACGGGGCGATCCACGCCTGA Protein sequence : MASYDVIIIGSGPGGYVGAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHASHQVHEAEHNFEKMGIKVPAPKID WKTMLAYKDDVIGQNTKGIEFLFKKNKVDWLKGWASIPEAGKVKVGDETHEAKHIIIASGSEPASIPGAEVEIDEKVVVT STGALELGKIPKRMVVVGGGVIGLELGSVYARLGTEVSVIEFMDGITPGQDLEVARQFQKILTKQGLKFITGAAVQKVAA TKSKAKVTYKMRKDDSEDSLEADIVLVSTGRKPFTEGLGLDALGVKMTERGQIATDGSYRTNVPGVYAIGDVIEGPMLAH KAEDEGMAVAEMIAGQHPHVNYGVIPGVIYTHPEVASVGKTEEQLKAEGVAYKVGKFSFMGNGRAKANFAADGFVKLLAD KATDRILGAHVIGPMAGDLIHEVCVAMEFGAAAEDLARTCHAHPTYSEAMREAALACGDGAIHA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 3e-57 | 42 |
