Gene Information

Name : hemC (Dshi_2704)
Accession : YP_001534038.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : 2.5.1.61
Position : 2864136 - 2865179 bp
Length : 1044 bp
Strand : -
Note : transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis

DNA sequence : 
ATGGGGATACTGAGATCCCGCCGTGATGTCAGCTTGATGGCGCAAAATGGGTTGTCAAGTCAAGTTGACACTTATAGAGA
TGCGACCATGACTATCACACTCCCGACCCCCGATTCACCCTTGAAAATCGGCACACGCGGCTCGCTGCTCGCGCTGGCCC
AGGCCCATGAGACGCGGGCCCGTTTGTCGGCCGCGTTCGACCTGCCGGAGGAGGCCTTCGAGATCGTGGTCATCAAGACC
ACCGGGGACCGGATCCAGGACCGCTCGCTGAGCGAGATCGGCGGCAAGGGCCTGTTCACCCGGGAAATCGAGGACGCCAT
GCTGGACGGGAGCATCGACATCGCGGTGCATTCGATGAAAGACATGCCCGTGGACACGCCCGCGGGACTGGCACTCGACA
CCTACCTGCCGCGCGAGGACGTGCGCGACGCCTTCGTGACGCTCGACGGGGGCACGCTGGCGGATCTGCCCGAGGGGGCC
GTGGTCGGGTCCAGTTCCCTGCGGCGGCGCGCGCAGCTGGCCCATCGGCGCCCGGACCTGCAACTGGTCGAGTTCCGCGG
CAATGTGCAGACCCGGATGAAGAAACTCGGCGACGGCGTGGCCCATGCGACCTTTCTTGCCATGGCGGGGTTGAACCGGC
TCGGCATGGACGAGGTCCCGCGCAGCGCGATTGCGCCCGAAGACATGCTGCCCGCGGTCGCCCAGGGCTGCATCGGGATC
GAACGGCGCGCCGATGATCCGCGTGCGGCCGAAATGCTGGCCGCGATCCACGACGGACCTTCCGGACACCGCCTGGCCTG
CGAGCGCGCCTACCTGTCGGCCCTGGACGGCTCGTGCCAGACCCCGATCGCCGGTCTGGCGGAGCTTGACGGCGGCTCGA
TTCACTTGCGTGCCGAAATTCTGCGCCCCGATGGCTCCGAAGTGCTGAGCGATTCCGAAACCGCACCGGTGGAAGATGCC
GCAAAAATGGGCAGGGAGGTGGCCGAACGCCTCCGCGCCCGCGCGCCCGACGGGTTTTTCAGCTGGCTGACGGCGCACGC
GTGA

Protein sequence : 
MGILRSRRDVSLMAQNGLSSQVDTYRDATMTITLPTPDSPLKIGTRGSLLALAQAHETRARLSAAFDLPEEAFEIVVIKT
TGDRIQDRSLSEIGGKGLFTREIEDAMLDGSIDIAVHSMKDMPVDTPAGLALDTYLPREDVRDAFVTLDGGTLADLPEGA
VVGSSSLRRRAQLAHRRPDLQLVEFRGNVQTRMKKLGDGVAHATFLAMAGLNRLGMDEVPRSAIAPEDMLPAVAQGCIGI
ERRADDPRAAEMLAAIHDGPSGHRLACERAYLSALDGSCQTPIAGLAELDGGSIHLRAEILRPDGSEVLSDSETAPVEDA
AKMGREVAERLRARAPDGFFSWLTAHA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 9e-50 45
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 9e-50 45