Gene Information

Name : Dshi_2590 (Dshi_2590)
Accession : YP_001533924.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4973
EC number : -
Position : 2756272 - 2756904 bp
Length : 633 bp
Strand : +
Note : PFAM: integrase family protein KEGG: rsh:Rsph17029_2267 phage integrase family protein; related to phage integrase

DNA sequence :
ATGCCAAGAGTCCAACTTCCCGCAGTAACGCCAAGACGCAAGGTTTGGAACAAGGGCCGCATCGTCGGACAGAAACGGCC
ACTGCGGCCGAGGCAGGTCTGGGCTATTCGTACAAGATTGGAGCTTTCGAACTGTCTACGCGATCTCACCCTTTTCAATG
TCGCAATAGATAGCAAATTGCGCGGTTGCGATCTTGTGAAACTTAAGGTGTCAGATCTGGCTAGTACCAGCCAGATCAAG
GAACGGGCGTCCGTTATCCAGACCAAAACGGGAAATCCCGTTAGGTTCGAATTGACCGAGAATACCAGACAATCGATCAT
GATTTGGCTTCGATCTCCCGAGATGCTTGGATGCGGGTTCATGTTTCCAAGCCGGTTTCATGATCGCCCTCACATCTCGA
CGCGCCAATATGGGAGGTTAGTTCGGGATTGGGTTACCGCGATAGGTCTTGAGCCGAGTGGATACGGTACACATTCATTG
CGACGCACCAAAGCAGCGGCAATTTACAGGAAGACAGGCAATCTGCGCGCCGTTCAGCTGCTTCTAGGTCATACGAAAGT
TGACAGCACAGTTCGCTACCTCGGTGTTGAGCTTGAAGATGCCCTGACCATCGCCGAGCAGATTGACATCTGA

Protein sequence :
MPRVQLPAVTPRRKVWNKGRIVGQKRPLRPRQVWAIRTRLELSNCLRDLTLFNVAIDSKLRGCDLVKLKVSDLASTSQIK
ERASVIQTKTGNPVRFELTENTRQSIMIWLRSPEMLGCGFMFPSRFHDRPHISTRQYGRLVRDWVTAIGLEPSGYGTHSL
RRTKAAAIYRKTGNLRAVQLLLGHTKVDSTVRYLGVELEDALTIAEQIDI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67363.1 putative recombinase Not tested PAI II CFT073 Protein 1e-54 57