Gene Information

Name : Dshi_2538 (Dshi_2538)
Accession : YP_001533872.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG0179
EC number : -
Position : 2695338 - 2696024 bp
Length : 687 bp
Strand : -
Note : Swiss-Prot: P76004-Uncharacterized protein ycgM PFAM: fumarylacetoacetate (FAA) hydrolase KEGG: rsh:Rsph17029_0213 fumarylacetoacetate (FAA) hydrolase; related to fumarylacetoacetate (FAA) hydrolase

DNA sequence :
ATGTCTGAGTACGTGATCGACACACCGCCCTTGGTGGCCTTGCCAATCGCCGGGATGGACGCACTTTTTCCGGTGCGGCG
TGTCTACTGCATCGGGCGTAACTATGCCGCCCATGCAATCGAGATGGGGCACAATCCCGATCGCGAGCCGCCGTTCTTCT
TCCAGAAAAACCCGAACAATCTCGACCCTTCCGGTGAGTTCCCCTACCCGCCCCACACCTCGGATGTGCATCACGAAGCC
GAAGTTGCGGTAATGTTGAAATCCGGCGGCACGAACATCCCCATCGACGAGGCCGAGAGCCATATCTACGGCTATGCGCT
ATCGTTGGACATGACGCGCCGGGATCTTCAGGGCGAGCAGAAGAAGATGGGGCGTCCCTGGGAAATCGGCAAGGCGTTCG
AGCGGTCGGCGCCCGTTGGTCCGATCCACCGGATCGAAGAGACCGGCCCGCTGAACGAGGGCGCTCTGCGCCTGACCGTG
AACGGTGAGACACGGCAGGAAGGCGACCTGAACCAGATGATCTGGAAGGTTGCTGAGATGATTTCCTATCTTTCGGAATA
TTTCGAGCTGGCGCCCGGGGATGTCATCCTGTCGGGCACGCCGTCCGGTGTGGCGGCGGTTGAGAGGGGCGATGTGATGG
AGATCTCCGTCGAAGGGCTCGGCAGCATGTCGGTCAAGGTCTTCTGA

Protein sequence :
MSEYVIDTPPLVALPIAGMDALFPVRRVYCIGRNYAAHAIEMGHNPDREPPFFFQKNPNNLDPSGEFPYPPHTSDVHHEA
EVAVMLKSGGTNIPIDEAESHIYGYALSLDMTRRDLQGEQKKMGRPWEIGKAFERSAPVGPIHRIEETGPLNEGALRLTV
NGETRQEGDLNQMIWKVAEMISYLSEYFELAPGDVILSGTPSGVAAVERGDVMEISVEGLGSMSVKVF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43829.1 putative isomerase Not tested LEE Protein 5e-60 50