Gene Information

Name : Dshi_2487 (Dshi_2487)
Accession : YP_001533822.1
Strain : Dinoroseobacter shibae DFL 12
Genome accession: NC_009952
Putative virulence/resistance : Unknown
Product : putative 47 kDa protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG0523
EC number : -
Position : 2642133 - 2643338 bp
Length : 1206 bp
Strand : -
Note : Swiss-Prot: P31521- 47 kDa protein; PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein

DNA sequence :
ATGCAGGACCGACTCCCCGTAACCGTGCTCTCGGGATTTCTCGGGGCAGGAAAGACAACACTGTTGAACCGCGTGCTCAA
CAACCGCGACGGACGCAAGGTCGCGGTCATCGTCAACGACATGTCCGAAGTGAATATCGACGCCGACCTCGTGCGCGCCG
AAACCGCGCTCAGCCGCACCGACGAGACTTTGGTCGAGATGTCCAACGGCTGCATCTGCTGCACCCTGCGCGACGACCTG
CTGCACGAGGTGCGCAGGCTCGCGGCGGCGGGGAAGTTCGACTACCTGCTGATCGAATCCACCGGCATCTCCGAGCCGCT
GCCCGTGGCCGCCACCTTCGAGTTTCGCGACGAAGCGGGCGAGAGCCTGTCAGATGTCGCCCGGCTCGACACGATGGTGA
CGGTCGTGGATGCGGTGAACCTGCTGCGCGATTATGCCAGCCATGATTTTCTGCGCGATCGCGGCGAAACGCTGGGAGAG
GCGGATGACCGCACCCTGGTGCATCTGCTCACCGACCAGATCGAGTTTGCCGATGTCGTGATCCTGAACAAGGTCGCAGA
TGCCGGGCCCGAGCGCACCGATGCCGCACGCCAGATCATCCGCAGCCTGAATGCCGATGCCAAGATCATCGAGACCGACC
ATGCCCAGGTCGCCGTGTCCGAGATCCTGGGCACCGGCCTGTTCGATTTCGACAAGGCCCATGACCACCCGCTCTGGGCC
AAGGAGCTCTACGGCTTTGCCGACCATGTCCCCGAAACCGAGGAATACGGGGTGGCGAGCTTCGTCTACCGCGCCCGCCG
TCCCTTCGTGCCCGAAGCGGCGATGGCCGTGCTCGAGGGCGAGATGCCCGGCGTGATCCGCGCCAAAGGGCATTTCTGGC
TCGCCACCCGCCCCGACTGGGTGGCGGAGTTCTCGCTCGCGGGCGCGCTGTCCTCGGTCCGGCCGCTGGGCACCTGGTGG
GCGGCGGTCCCCGAGGCCCGCTGGCCGGAAAGCGCGGCCGCGCGTGCCTATTTCACACAGCACTGGCAGGAGCCATGGGG
TGACCGGCGGCAGGAGATCGTCTTCATCGGTGTCGGGATCGACTGGCCCGCCCTCAAGGCCCGGCTCGACGCCTGCCTGC
TGCCCGAAGACTTGGCGACCGGCCCCGACACCCTGCCGGACCTGCCCGATCCCTTCCCGGCCTGGCGCCGGGCGGAGGCC
GCGTGA

Protein sequence :
MQDRLPVTVLSGFLGAGKTTLLNRVLNNRDGRKVAVIVNDMSEVNIDADLVRAETALSRTDETLVEMSNGCICCTLRDDL
LHEVRRLAAAGKFDYLLIESTGISEPLPVAATFEFRDEAGESLSDVARLDTMVTVVDAVNLLRDYASHDFLRDRGETLGE
ADDRTLVHLLTDQIEFADVVILNKVADAGPERTDAARQIIRSLNADAKIIETDHAQVAVSEILGTGLFDFDKAHDHPLWA
KELYGFADHVPETEEYGVASFVYRARRPFVPEAAMAVLEGEMPGVIRAKGHFWLATRPDWVAEFSLAGALSSVRPLGTWW
AAVPEARWPESAAARAYFTQHWQEPWGDRRQEIVFIGVGIDWPALKARLDACLLPEDLATGPDTLPDLPDPFPAWRRAEA
A

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0408 YP_042534.1 cobalamin synthesis protein Not tested vSa¥á Protein 1e-78 50
SAR0450 YP_039898.1 cobalamin synthesis protein Not tested vSa¥á Protein 6e-79 50