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Name : ctaD (Dshi_2383) Accession : YP_001533720.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit 1 Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : 1.9.3.1 Position : 2517133 - 2518809 bp Length : 1677 bp Strand : + Note : Swiss-Prot: P33517- Cytochrome c oxidase subunit 1 ctaD TIGRFAM: Cytochrome c oxidase subunit I type PFAM: cytochrome c oxidase subunit I DNA sequence : ATGGCAGATGCAGCCATCCATGGCCACGGTCACGAAGATACCCGCGGGTTCTTCACCCGTTGGTTCATGTCGACCAATCA CAAGGATATCGGGATCCTCTATATCCTCGTGGCGGGTCTGGCCGGGTTCATTTCGGTCGCCTTCACGGTTTACATGCGCA TGGAGTTGATGAACCCCGGCGTTCAGTACATGTGTACCGAGGGCGCGCGCTTCATCGCGGCCGGCGCGAACGATGTCTGT ACGCCGAACGGGCACCTGTGGAACGTGCTGATCACCGGCCACGGCATCCTGATGATGTTCTTCGTGGTGATCCCGGCCCT CTTCGGCGGTTTCGGCAACTATTTCATGCCCTTGCACATCGGTGCGCCGGACATGGCCTTCCCGCGGCTGAACAACCTGT CCTTCTGGCTCTACGTGGCCGGGACGTCGCTGGCGATTGCCTCGGTGCTGGCACCGGGCGGCAATGGCCAGACAGGTTCC GGCGTGGGCTGGGTGCTCTATCCGCCGCTGTCCACGACTGAGGCCGGGTTCTCGATGGATCTGGCGATCTTCGCGGTCCA CGTGTCGGGCGCCTCGTCGATCCTCGGCGCGATCAACATCATCACGACCTTCCTGAACATGCGCGCCCCGGGCATGACAC TGTTCAAAGTGCCGCTCTTTGCCTGGTCGATCTTCGTCACCGCCTGGCTGATTCTTCTGGCCCTGCCGGTTCTGGCGGGC GCGATCACCATGTTGTTGACCGACCGGAATTTCGGGACGACCTTCTTCGACCCGGCCGGCGGCGGCGACCCGGTGCTTTA TCAGCATATCCTGTGGTTCTTCGGCCACCCGGAAGTCTACATCGTGATCCTGCCAGCCTTCGGCATCATCAGCCACGTGA TCGCGACCTTCTCGCGCAAGCCCGTCTTCGGCTACATGCCCATGGTCTGGGCGATGATCGCGATCGGCGGCCTGGGCTTC GTGGTCTGGGCACACCACATGTACACGGTGGGCATGTCCCTGACCCAGCAGAGCTACTTCATGCTGGCGACCATGGTCAT CGCGGTGCCAACGGGGGTGAAGATCTTCAGCTGGATCGCGACCATGTGGAAGGGGTCTCTGACGTTCGAGACACCGATGC TCTTTGCCATCGGGTTCCTGTTCCTGTTCACCGTGGGCGGCGTGACCGGTATCGTGCTGTCCCAGGCGGGCGTCGACCGG GCCTATCACGACACCTACTACGTGGTGGCTCACTTCCACTACGTGATGAGCCTCGGGGCGGTGTTCGGAATCTTCGCCGG GATCTACTTCTGGATCGGCAAGATGTCGGGCCGTCAGTACCCGGAATGGGCCGGCAAGGTGCACTTCTGGACCTTCTTCA TCGGTACCAACATCACCTTCTTCCCGCAGCACTTCCTGGGCCGCCAGGGCATGCCGCGCCGCTACATCGATTACCCGGAG GCCTTCGGGCTCTGGAACTGGGTGTCGAGCTGGGGCGCGTTCCTGTCCTTCGCCTCGTTCCTCTTCTTCATCGGTGTGGT CTTCTACACCATCACCCGCGGCAAGCGCGTGGAAGAAGAGAACTACTGGAACGAGCATGCGGACACCCTGGAGTGGACCC TGCCCAACCCGCCGCCCGAGCACACGTTCGAGCAGCTCCCGACCCGGGACATGTGGGACAAGCAGCCGTCGCACTGA Protein sequence : MADAAIHGHGHEDTRGFFTRWFMSTNHKDIGILYILVAGLAGFISVAFTVYMRMELMNPGVQYMCTEGARFIAAGANDVC TPNGHLWNVLITGHGILMMFFVVIPALFGGFGNYFMPLHIGAPDMAFPRLNNLSFWLYVAGTSLAIASVLAPGGNGQTGS GVGWVLYPPLSTTEAGFSMDLAIFAVHVSGASSILGAINIITTFLNMRAPGMTLFKVPLFAWSIFVTAWLILLALPVLAG AITMLLTDRNFGTTFFDPAGGGDPVLYQHILWFFGHPEVYIVILPAFGIISHVIATFSRKPVFGYMPMVWAMIAIGGLGF VVWAHHMYTVGMSLTQQSYFMLATMVIAVPTGVKIFSWIATMWKGSLTFETPMLFAIGFLFLFTVGGVTGIVLSQAGVDR AYHDTYYVVAHFHYVMSLGAVFGIFAGIYFWIGKMSGRQYPEWAGKVHFWTFFIGTNITFFPQHFLGRQGMPRRYIDYPE AFGLWNWVSSWGAFLSFASFLFFIGVVFYTITRGKRVEEENYWNEHADTLEWTLPNPPPEHTFEQLPTRDMWDKQPSH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 2e-88 | 44 |
