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Name : xylA (Dshi_1996) Accession : YP_001533336.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : xylose isomerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2115 EC number : 5.3.1.5 Position : 2114512 - 2115816 bp Length : 1305 bp Strand : - Note : catalyzes the interconversion of D-xylose to D-xylulose DNA sequence : ATGAGCGATTTTTTCGCGGGGATCCCCGCCGTCACCTATGAAGGCCCCGAGGCCCGCAGCGACTTCGCCTTCCGGCACTA CAACCCCGACGAGATGGTCATGGGCAAGCGGATGGAGGATCAGCTGCGCTTCGCCGTGGCCTGGTGGCATTCCTTTGCTT GGGAAGGGGGCGACCCGTTCGGCGGTCCGACCTTCCAGCGCCCGTGGTTCGGCGACACCCTGGATCATGCCCGCGCCAAG GCCGATGCGGCGTTCGAGATGTTCCGCATCCTGAACGTGCCGTTCTATTGCTTCCACGACGCCGATATCCGCCCCGAGGG CGCGAGTTTCGCCGAGACCACCGCGAACCTTGAAGCGATGGTGGACTACCTGGGCCAGAAGCAGGAGGCGAGCGGCAAGC GGCTGCTCTGGGGCACCGCGAACCTGTTCTCGCACCGGCGCTACATGGCTGGGGCGGCGACGAACCCGGACCCGGATGTG TTCGCCTATGCCGCCGCCACCATCAAGACCTGCATGGACGCGACCCACAAACTGGGCGGCGCGAATTATGTCCTGTGGGG CGGGCGCGAGGGGTACGAGACCCTGCTCAACACCGATCTGGGGCGCGAGCGGGAGCAGGCGGGCCGGATGCTGCAGATGG TTGTGGATTACAAGCACAAGATCGGGTTCGAGGGCACGATCCTGCTGGAGCCGAAACCGCAGGAGCCCACGAAGCACCAA TATGATTACGACGTGGCCACGGTGTTCAGCTTTCTGTCGGAGTTCGGCCTGCAGGACGAGGTGAAGATGAATATCGAGCA GGGCCATGCGATCCTGGCCGGGCATTCCTTCGAGCATGAGCTGGCGCTGGCGCGGGAGTTCGGGATCCTGGGCTCCATCG ACATGAACCGCAACGATTACCAGTCGGGCTGGGACACCGACCAGTTCCCGAACAACATCCCCGAGGTGGCGCTGGCCTAT TACGAGATCCTGCGCGCGGGCGGCTTCGATACCGGGGGCACCAATTTCGATTCCAAGCTGCGGCGGCAATCGCTGGACCC GGCGGACCTGATCGCGGCCCATGTGGCGGCGATGGATGTCTGTGCCGCGGGGCTGAAGGCGGCGGCACGGATGCTGGAGG ATGGCGAGTTGGAGCAGCGGCGCGAGGATCGCTATGCGGGCTGGCGCGCGCCCTCGGCGGAAGCGATGCTGAACGGTGGC AAGCTGGAGGACTGCTTTGCCCATGTGATGGAGACCGGGCTTGATCCGCAGCCGGTCTCGGGCGGGCAGGAACGGCTGGA GGCGCTGGTCGCGCGATACCTGTAA Protein sequence : MSDFFAGIPAVTYEGPEARSDFAFRHYNPDEMVMGKRMEDQLRFAVAWWHSFAWEGGDPFGGPTFQRPWFGDTLDHARAK ADAAFEMFRILNVPFYCFHDADIRPEGASFAETTANLEAMVDYLGQKQEASGKRLLWGTANLFSHRRYMAGAATNPDPDV FAYAAATIKTCMDATHKLGGANYVLWGGREGYETLLNTDLGREREQAGRMLQMVVDYKHKIGFEGTILLEPKPQEPTKHQ YDYDVATVFSFLSEFGLQDEVKMNIEQGHAILAGHSFEHELALAREFGILGSIDMNRNDYQSGWDTDQFPNNIPEVALAY YEILRAGGFDTGGTNFDSKLRRQSLDPADLIAAHVAAMDVCAAGLKAAARMLEDGELEQRREDRYAGWRAPSAEAMLNGG KLEDCFAHVMETGLDPQPVSGGQERLEALVARYL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| xylA | NP_814326.1 | xylose isomerase | Not tested | Not named | Protein | 3e-95 | 45 |
| ef0082 | AAM75286.1 | EF0082 | Not tested | Not named | Protein | 3e-95 | 45 |
