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Name : serS (Dshi_1863) Accession : YP_001533206.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 1941457 - 1942752 bp Length : 1296 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCATGACATTCGCCTGATCCGCGAGACGCCGGAGGCGTTCGACGCCGCGCTGACCCGCCGCCCCGGGGTGGCGCCGGT CTCGGGCGAGATCCTCGCGCTGGATGCCGCCCGGCGGGAGAAGATCCTGGCTGCGGAGACCGCGCAGGCGGAGCAGAACG CGGCCTCCAAGCAGGTGGGGGCGGCCAAGGCCGCGGGGGATGAGGCGGAGTTCGAGCGGCTGCGCGCGTTGGTGGGCGCG AAGAAGGCGGAGGTGGCCGCGCTCAAGGCCGCGGCGGCGGAGGATGATGCGGCGCTGAGCGCGCGGCTGATGGAGATCCC CAACTTGCCCTTCGACGATACGCCCGAGGGCGCGGACGAGGCGGACAATGTGGAGATCAAGCGCTGGGGCACGCCGCGCG ACCTGGGATTTGCGCCGAAGGAGCATTACGCGCTGCCCAGCGTCGTGCCGGGCATGGATTTCGAGGCGGCGGCGAAGCTG TCGGGGTCGCGGTTCGTGGTGCTGTCGGGGGCCGTGGCGCGGGTCCACCGGGCGCTGGCGCAGTTCATGGTCGACACCCA TGTGGAGCAGAACGGTCTGACCGAGACCTGGACGCCGGTGCTGGTGCGCGAGGAGATGATGCTCGGCACCGGGCAGTTGC CGAAGTTCGGGGAGGACAGCTACCAGACGCGGGAGGGCTGGTGGCTGGTGCCCACAGCGGAGGTGAGCCTGACCAACCTG GTGGCGGGCGAGATCGTGGAGGCGGCCTCCCTGCCCCGGCGCTATGTGGCCCATACCCAGTGCTTCCGGTCCGAGGCGGG CTCGGCGGGGCGGGACACGGCCGGCATGCTGCGCCAGCACCAGTTCGAGAAGGTGGAGATGGTGTCGGTGACGCGGCCCG AGGACAGCCGGGCGGAGCTGGACCGGATGACCGGCTGCGCCGAGGGGATTCTGGAGGCGCTGGGGTTGCCCTACCGCACC ATCGTGCTGTGCACCGGGGACATGGGCTTCGGGGCGCGGCGGACCCATGATATCGAGGTCTGGCTGCCCGGGCAGGACGC CTATCGCGAGATCAGCTCGGTCTCGGTCTGCGGCGATTTCCAGGCGCGGCGGATGAATGCGCGGTTCCGGCCGGAGGGCG GGGGCAAGCCGGAGTTCGTGCATACGCTGAACGGGTCGGGGCTGGCCGTGGGGCGGTGCCTGATCGCGGTGCTGGAGAAC GGGCAGCAGGCGGACGGGTCGGTGGTGCTGCCGGAGGTGCTGCATGGGTATCTGCGGGGGCGGACGCGGATCGACGCTCA GGGGGGGCTCGTCTGA Protein sequence : MHDIRLIRETPEAFDAALTRRPGVAPVSGEILALDAARREKILAAETAQAEQNAASKQVGAAKAAGDEAEFERLRALVGA KKAEVAALKAAAAEDDAALSARLMEIPNLPFDDTPEGADEADNVEIKRWGTPRDLGFAPKEHYALPSVVPGMDFEAAAKL SGSRFVVLSGAVARVHRALAQFMVDTHVEQNGLTETWTPVLVREEMMLGTGQLPKFGEDSYQTREGWWLVPTAEVSLTNL VAGEIVEAASLPRRYVAHTQCFRSEAGSAGRDTAGMLRQHQFEKVEMVSVTRPEDSRAELDRMTGCAEGILEALGLPYRT IVLCTGDMGFGARRTHDIEVWLPGQDAYREISSVSVCGDFQARRMNARFRPEGGGKPEFVHTLNGSGLAVGRCLIAVLEN GQQADGSVVLPEVLHGYLRGRTRIDAQGGLV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-76 | 53 |
