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Name : Dshi_1657 (Dshi_1657) Accession : YP_001533000.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Virulence Product : ABC-3 metal transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1723024 - 1723923 bp Length : 900 bp Strand : - Note : SWISSPROT Q55282: Manganese transport system membrane protein mntB, P44661: Probable iron transport system membrane protein HI0360; COG: COG1108 - ABC-type Mn2+/Zn2+ transport systems, permease components; PFAM: pfam00950; SUPERFAMILY: SSF81345 DNA sequence : GTGATCGGGACGCTTCTGGAGCCGTTCAGCTACGGCTACATGACAAATGCGATCTGGGTCAGCGCGCTGGTTGGGGCGGT CTGTGCCTTTCTGTCGTGTTACCTGATGCTCAAGGGCTGGTCGTTGATCGGCGACGCGCTGAGCCATGCGATCGTGCCGG GTGTGGCGGGCGCATACATGCTGGGGCTGCCCTTCGCACTCGGGGCGTTCCTGTCCGGGGGCTTGGCGGCAGGTACAATG CTGTTTCTGAACCAGCGCTCCGGGCTGAAGGAGGACGCGATCATCGGTCTGATCTTCACCTCTTTCTTCGGGCTGGGCCT GTTCATGATGTCGATCTCGCCGACATCCGTGGATATCCAGACCATCATGCTGGGCAATATCCTGGCGATCACGCCGACTG ATACAGTGCAGCTGGTTTTAATCGGAGGCGTGTCGCTCGCCGTGCTTCTGGTGAAGTGGAAGGACCTGATGGTCACATTC TTCGACGAGAACCACGCGCGGTCCATCGGGCTGAACCCGGTCCGATTGAAGTTCCTGTTCTTCGTGCTTCTTTCGGCCTG TACGGTCGCAGCGTTGCAAACGGTTGGCGCTTTTCTCGTGATCGCCATGGTGGTGACACCGGGCGCGACCGCCTACCTTT TGACCGACCGGTTCCAACGGCTGTTGATCATCGCGGTCTGCATCGGAGCGGGGAGTGCGGCTGTTGGGGCCTATTTTAGC TACTATCTCGACGGGGCGACGGGCGGGATCATCATTTGCTTGCAGACGCTCCTGTTTCTGCTGGCGTTCTTCTTTGCGCC CAAGCACGGGCGTCTGGCCGCGCGGCGGCGGGCCGCGCGTGGCATGGTCATGGCACAGCCGTCGGAGGGTGCGACGCGCC CCCTGGAGGCGGCAGAATGA Protein sequence : MIGTLLEPFSYGYMTNAIWVSALVGAVCAFLSCYLMLKGWSLIGDALSHAIVPGVAGAYMLGLPFALGAFLSGGLAAGTM LFLNQRSGLKEDAIIGLIFTSFFGLGLFMMSISPTSVDIQTIMLGNILAITPTDTVQLVLIGGVSLAVLLVKWKDLMVTF FDENHARSIGLNPVRLKFLFFVLLSACTVAALQTVGAFLVIAMVVTPGATAYLLTDRFQRLLIIAVCIGAGSAAVGAYFS YYLDGATGGIIICLQTLLFLLAFFFAPKHGRLAARRRAARGMVMAQPSEGATRPLEAAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 3e-80 | 78 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 3e-80 | 78 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 3e-80 | 78 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 3e-80 | 78 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 2e-80 | 78 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 1e-37 | 41 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 1e-37 | 41 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-37 | 41 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 9e-38 | 41 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 9e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | BAC0351 | Protein | 1e-80 | 78 |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | BAC0441 | Protein | 5e-69 | 68 |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | BAC0442 | Protein | 8e-37 | 43 |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | BAC0352 | Protein | 6e-38 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | VFG0527 | Protein | 1e-80 | 78 |
| Dshi_1657 | YP_001533000.1 | ABC-3 metal transporter | VFG0528 | Protein | 6e-38 | 41 |
