Name : Dshi_1656 (Dshi_1656) Accession : YP_001532999.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Virulence Product : ABC-3 metal transporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 1722176 - 1723027 bp Length : 852 bp Strand : - Note : SWISSPROT Q55282: Manganese transport system membrane protein mntB, P44660: Probable iron transport system membrane protein HI0359; COG: COG1108 - ABC-type Mn2+/Zn2+ transport systems, permease components; PFAM: pfam00950; SUPERFAMILY: SSF81345 DNA sequence : ATGATCGATACTCTCTTTGCGCCGTTCCAGTTTCCGTTCATGCAGAACGCATTCCTGATCGCGGTGCTCATTTCGGTGCC CACGGCGATCCTGTCGTGCTTCGTGGTGCTGAAGGGCTGGAGCCTTATGGGCGACGCGATCAGCCATGCGGTGCTGCCCG GGATCGTACTGGCCTATGTGCTGGGCATCCCGCTGATCTTCGGGGCTTTCGCGGCGGGAATGACCTGCGCGTTGGCGACG GGATATCTGCAGGCCCACAGCCGGGTGAAGCAGGACACGGTGATGGGGGTGGTGTTCTCGGGGATGTTTGGGCTCGGGTT GGTGATCTACACCAAGATCGAGACCAACATGCACCTTGACCACATCCTTTTCGGCAACATGTTGGGGATCGGGTCCGGGG ATCTGGCGACCGCGGGCATCATTGCTGTGGTGGTTGCGGGCATCTTGTTGGTGAAATGGCGGGATTTCCTGCTTCATGCT TTCGATCCGGCGCAGGCGCGGGCGGTGGGGCTACGGGTAGCCTGGCTTCATTACGGGCTTCTGGCGTTGATTTCGCTGAC CATCGTTGCGGTGCTCAAGGCGGTCGGGATCATCCTTGCCATCGGCTTGCTGATCGCGCCCGGGGCGATTGCGTTTCTTG TGACCAAGCGGTTCGTGCATATGCTGTGGATTGCGGTGGCGGTGACGTGCCTCGCGTCAATCTCCGGTGTCTATGCCAGT TTCTGGCTCGACAGTGCGCCTGCACCGACAATCATTCTGATCCTGTCGGCGGTCTTCGTGGCAGCCTTCGTGCATAAGCT CTGGCGCGCGGGCCGGACAGAACAGCGGACCGAGCCTTTGCCGGCCCCTTAG Protein sequence : MIDTLFAPFQFPFMQNAFLIAVLISVPTAILSCFVVLKGWSLMGDAISHAVLPGIVLAYVLGIPLIFGAFAAGMTCALAT GYLQAHSRVKQDTVMGVVFSGMFGLGLVIYTKIETNMHLDHILFGNMLGIGSGDLATAGIIAVVVAGILLVKWRDFLLHA FDPAQARAVGLRVAWLHYGLLALISLTIVAVLKAVGIILAIGLLIAPGAIAFLVTKRFVHMLWIAVAVTCLASISGVYAS FWLDSAPAPTIILILSAVFVAAFVHKLWRAGRTEQRTEPLPAP |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 2e-67 | 59 |
sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-67 | 59 |
sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-67 | 59 |
sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 1e-67 | 59 |
sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 8e-68 | 59 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Dshi_1656 | YP_001532999.1 | ABC-3 metal transporter | BAC0352 | Protein | 5e-68 | 59 |
Dshi_1656 | YP_001532999.1 | ABC-3 metal transporter | BAC0442 | Protein | 4e-56 | 54 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Dshi_1656 | YP_001532999.1 | ABC-3 metal transporter | VFG0528 | Protein | 5e-68 | 59 |