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Name : Dshi_1004 (Dshi_1004) Accession : YP_001532347.1 Strain : Dinoroseobacter shibae DFL 12 Genome accession: NC_009952 Putative virulence/resistance : Unknown Product : acyl-CoA dehydrogenase domain-containing protein Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1960 EC number : - Position : 1037708 - 1038925 bp Length : 1218 bp Strand : - Note : contains middle and C-terminal domain, N-terminal domain not conserved DNA sequence : ATGGATTTCGAGCTGCCGGTCGAGGTGGAGGCGCTGCGCGCGCGCGTGGCGGATTTCGTGGCGGGCGAGATCCTGCCGCT GGAGGCGGATCGCGCCAATTTCGACGCCCATGACAACATCGCCTTGCCGGTGCTGGAGACCGTGCGCGCCAAGGCGAAGG CCGCAGGGCTCTGGGCGCCGCAATCGCCCCGCGCGCGGGGCGGCATGGGGCTGAGCACGGTCGCCCGCGCGGTGTTCTAC GAGGAGGCGAACCGCTCGATCTTTGGCCCGGTATGCTTCAACTGCGCGGCCCCGGATGATGGCAACATGGCGGTGCTGGC CCAGCTTGGCACGCCCGCGCAGCAGGACCGCTGGCTGCAACCGATCATCGACGGGCGCGTGCGCTCGGCCTTTGCGATGA CCGAGCCCCATCCGGGCGGCGGGTCCGATCCGGGCATGATGCGGACCCGCGCCGAAAAACGCGGCGACGGGTACGTGGTC CACGGGCACAAGTGGTACATCACCGGGGCGGCGGAGGCGCAGCATTTCATCCTGCTGGCGCGGACATCGGACGACCCCAA ACGCGGCCACACGGCGTTTCTGTTCGACGCGGACCAGCCCGGCTGGCGGATCGACCGGCGGATCCCGATCATGGGCCCCG AGGAGCATGGCGGCCATTGCGAGCTGATCTTCGACGGGCTGGAGATATCGGCCGAGAACGTTCTGATGGAAGAGGGGCGC GGGATGAAGGTCACGCAGACCCGGCTCGGCCCCGCGCGGCTGACCCATTGCATGCGCTGGCTGGGGCTGGCCAAGCGCTG CGTCGAGATCGCGACCGAGTATGCGGCGACGCGCGAGGGGTTCGGGGTGCGGCTGGCCGATCGCGAGAGTATCCAGCTGA TGCTGGGCGGGCTGGCCATGGATATCGAGGTCGGACGGCTTCTGACCATGAAGGCCGCGTGGGAGATCGACCAGGGCGGC TTCGCGCGCAAGGAGGTGTCCATGGCCAAGATCCACGTGGCCAACCTGCTGCACCGCGCGGCGGACGTGGCGATCCAGAT CAACGGGGCGCGGGGCTATTCCAGGGACACGGTGTTGGAGTGGATTTACCGCTATGCAAGGCAGGCGCGGCTGGTGGACG GGGCGGACGAGGTGCACCGGATGGTGCTGAACCGGGTGCTGGTGGACGAGGGGCGCGATTTCTGGCGCTGGCCCGTGGCG GACCGCGTGGCGGAATGA Protein sequence : MDFELPVEVEALRARVADFVAGEILPLEADRANFDAHDNIALPVLETVRAKAKAAGLWAPQSPRARGGMGLSTVARAVFY EEANRSIFGPVCFNCAAPDDGNMAVLAQLGTPAQQDRWLQPIIDGRVRSAFAMTEPHPGGGSDPGMMRTRAEKRGDGYVV HGHKWYITGAAEAQHFILLARTSDDPKRGHTAFLFDADQPGWRIDRRIPIMGPEEHGGHCELIFDGLEISAENVLMEEGR GMKVTQTRLGPARLTHCMRWLGLAKRCVEIATEYAATREGFGVRLADRESIQLMLGGLAMDIEVGRLLTMKAAWEIDQGG FARKEVSMAKIHVANLLHRAADVAIQINGARGYSRDTVLEWIYRYARQARLVDGADEVHRMVLNRVLVDEGRDFWRWPVA DRVAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01498.1 | putative acyl-CoA dehydrogenase | Not tested | PAGI-1 | Protein | 1e-72 | 46 |
