Gene Information

Name : Dole_0044 (Dole_0044)
Accession : YP_001527931.1
Strain : Desulfococcus oleovorans Hxd3
Genome accession: NC_009943
Putative virulence/resistance : Unknown
Product : single-strand binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 54260 - 54673 bp
Length : 414 bp
Strand : +
Note : TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: aeh:Mlg_2746 single-strand binding protein

DNA sequence :
ATGGCAGGCGTAAACAAGGCGATTATCGTTGGAAGACTGGGAAGAGACCCGGAATTGCGCTACACACAGGACGGACGGGC
CGTGGCCAGTTTCAGCGTGGCCACATCCGAAGAGTGGAAAGACAAGGATTCCGGCGACAAAAAAGAACGCACCGAGTGGC
ACCGGGTCGTGGCCTTCGGCCGGCTCGGTGAGATCTGCGGCGAATACCTGGCCAAGGGCCGGCTGGTCTATGTGGATGGA
CGGCTTCAGACCCGGTCCTGGGAAAAGGACGGGGTCACGCGCTATACCACGGAGATCGTGGCTGCCAACATGCAGATTCT
CGAACCCAAGGGCAGCGGCGGCTCCGGTGGCGGCGGCTCCATGGGCGAGCCGGTTGCCGATGATGCGGGCATTCCCGACG
ACATCCCCTTCTAA

Protein sequence :
MAGVNKAIIVGRLGRDPELRYTQDGRAVASFSVATSEEWKDKDSGDKKERTEWHRVVAFGRLGEICGEYLAKGRLVYVDG
RLQTRSWEKDGVTRYTTEIVAANMQILEPKGSGGSGGGGSMGEPVADDAGIPDDIPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 6e-28 55
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 5e-16 43
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 4e-16 43
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 1e-15 42
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 2e-15 41