Gene Information

Name : Dole_0367 (Dole_0367)
Accession : YP_001528254.1
Strain : Desulfococcus oleovorans Hxd3
Genome accession: NC_009943
Putative virulence/resistance : Unknown
Product : transketolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0021
EC number : -
Position : 423656 - 425671 bp
Length : 2016 bp
Strand : +
Note : TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: gvi:glr2297 transketolase

DNA sequence :
ATGGCCACCAGAAAAACCGCGGGCAACAAGCCGATCGACGAACGATGCATCAACACCATTCGATGCCTTGCCATGGACGC
CATTCAGCAGGCCAACTCCGGCCATCCCGGGGCGCCCATGGGTCTTGCGCCGGCGGGATATGTTCTGTGGACAAAGGTGA
TGAAGCACAATCCGAAAAATCCCCAGTGGTTCAACCGGGACCGGTTCGTTCTGTCCGGTGGCCATGCCTCCATGCTGCTC
TACAGCCTGCTTCACCTGACCGGTTATGAGCTTTCCTTAAAAGACATTCAGCAGTTTCGCCAACTGGGCAGCAAAACCCC
GGGCCATCCGGAGTACGGCCACACCCCCGGCGTGGAGACCACTACCGGTCCTTTGGGCCAGGGGTTTGCCAATGCCGTGG
GCATGGCCATGGCCGAGCGTCACATGGCGGCCCGGTTTAACCGCAAGGGTGCGACCATTGTGGACCACTTTACCTACGTG
ATGTGCGGCGACGGGGACCTGATGGAGGGCCTCTCCTATGAATCGGCTTCCCTGGCCGGACACCTGGGCCTGGGCAAACT
GATCTGCCTGTATGACGACAACGACATCTCCATTGAGGGCCACACCGATATCACCTTTACCGAAAACGTGGCGGCCCGGT
TCAAGGCCTGCAACTGGCATGTGGTGCCGGTCAAAGACGGCAGCAGCGTGGACCAGATTCTCGACGCGCTGAAAGCGGCC
CAGGCCGAGACTGAAAAGCCGTCGCTCATCATCCTTAAAACCCATATCGCCCACGGCAGCCCCAACAAGCAGGACAGTGC
CGACGCCCATGGCGCGCCCCTGGGAAAAGAGGAAATTGTTCTGACAAAAAGAAACCTGGGGTTCCCCGAAGACGTGGTCT
GCCACATCACAGAAGACGCTTTGAAGGTTTTCAGAAAATGCATGGAAAAAGGGGAAAAGGCCCAGGGAAAATGGCGGGCC
ATAGTAGACCGCTACGCAGAAAAGTTTCCCGACCTGGCCGCCCAGTGGACCGCGGCAATTACACACCGGCTGCCCAAAGG
GTGGGACAAAAACCTTTCCGGTTTTTTACCGTCCGACAAGCCCATGGCCACCCGGTCCGCATCGGGAAAGGTCTTAAACA
AGCTGGCCGAAGCCATTCCCGCGATCATCGGCGGGTCCGCGGACCTGGCCCCGTCCAACAACACCTTTCTGGCCTGTTCC
GGCGAGTTTCAGAAAGGCACCTATGACCAGCGCAACATCCGGTTCGGGGTGCGGGAGCACGCCATGGCATCCATCATGGC
CGGCATGTACCTGCACGGCGGCCTGCGGCCCTACGGCGGCACCTTTCTGATCTTTTCCGATTACATGCGGCCCGCCATAC
GGGTGGCCAGCCTGATGAAACTGCCCCTGATCTATGTGTTCACCCACGACAGCGTGGCCGTGGGCGAAGACGGCCCCACC
CACCAGCCCGTGGAACAGCTGGCCTCGCTGCGGGCCATGCCCGGCCTTACCGTGATCCGGCCGGCCGACGCCACGGAAAC
CGTGGACGCCTGGAAGGTGGCCGTCACCAACACCGCCGGCCCGGTGGCCCTGGCCTTAAGCCGCCAGAACCTGCCGGTGC
TTGATGCCGCCATAACAGCGGGCAAGCTGGCCAAAGGCGCCTATGTACTGGAAGAGTGTTCCGGCCGGCCCGACATCATC
CTGATCAGTACCGGCGCCGAGGTGCATGTCACCCTGGAGGCCGCCAAACTGCTGGCGCAAAAAAATATTGCCGCAAGAGT
GGTCAGTATGCCCAGCTGGGAGCTGTTTGAAAAAACCGACGCGACCTACCGGGAGTCCGTGCTGATCCCCGGGGTCCCCT
GTTTTGCCGTTGAAGCAGGGTCCCCCATGGGATGGGAGCGGTACACAAAAGACAGCCATGCCATTCTGGGCATCGACCGG
TTCGGCACATCGGCCCCGGGCGGCACCGTGCTGAAGGAGTACGGCTTTACCCCGGAAAACATCGTGAAAAAAGTAACGGC
GGTACTCGGAAAATAG

Protein sequence :
MATRKTAGNKPIDERCINTIRCLAMDAIQQANSGHPGAPMGLAPAGYVLWTKVMKHNPKNPQWFNRDRFVLSGGHASMLL
YSLLHLTGYELSLKDIQQFRQLGSKTPGHPEYGHTPGVETTTGPLGQGFANAVGMAMAERHMAARFNRKGATIVDHFTYV
MCGDGDLMEGLSYESASLAGHLGLGKLICLYDDNDISIEGHTDITFTENVAARFKACNWHVVPVKDGSSVDQILDALKAA
QAETEKPSLIILKTHIAHGSPNKQDSADAHGAPLGKEEIVLTKRNLGFPEDVVCHITEDALKVFRKCMEKGEKAQGKWRA
IVDRYAEKFPDLAAQWTAAITHRLPKGWDKNLSGFLPSDKPMATRSASGKVLNKLAEAIPAIIGGSADLAPSNNTFLACS
GEFQKGTYDQRNIRFGVREHAMASIMAGMYLHGGLRPYGGTFLIFSDYMRPAIRVASLMKLPLIYVFTHDSVAVGEDGPT
HQPVEQLASLRAMPGLTVIRPADATETVDAWKVAVTNTAGPVALALSRQNLPVLDAAITAGKLAKGAYVLEECSGRPDII
LISTGAEVHVTLEAAKLLAQKNIAARVVSMPSWELFEKTDATYRESVLIPGVPCFAVEAGSPMGWERYTKDSHAILGIDR
FGTSAPGGTVLKEYGFTPENIVKKVTAVLGK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tktA AAO17218.1 TktA Not tested tcd island Protein 4e-146 49
APECO1_2641 YP_859417.1 transketolase Not tested Not named Protein 6e-145 49