Gene Information

Name : Dole_2801 (Dole_2801)
Accession : YP_001530681.1
Strain : Desulfococcus oleovorans Hxd3
Genome accession: NC_009943
Putative virulence/resistance : Resistance
Product : copper-translocating P-type ATPase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG2217
EC number : -
Position : 3379784 - 3381949 bp
Length : 2166 bp
Strand : -
Note : TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; E1-E2 ATPase-associated domain protein; KEGG: mac:MA0

DNA sequence :
ATGACCAGGGCCGATGAGAAACATTCCGGCGACAAAGACGCGGCAGTGGACGATCATGCATCTCCCCATGGCGGAGGCGC
TGACCATCACCATGATCAGGGAGAAGATGGCGGGCGTGGGCATGGGAATCACGATCATCATGCCAGACATCAAAAAGAGG
GGAACGGGACACATCAGGATCACCGGCAACACGGCGCGCACCAGGGACACCAGGACCATCACGCCCACATGGTGGCGGAT
TTCAGACGGCGGTTCTGGATTGCGCTGGTACTGAGCGTTCCCATTGTTTTGCTGGCACCGCTCATTCAGGGGGCGCTGGG
GGTCAAAGGGAAGTGGGATTTCCCGGGGGATGCCCTGGTGCAGTTCGGATTCGCGACGGTTGTCTTTTTCTATGGGGGGT
GGCCTTTCCTCAAAGGGCTTGCCGACGAACTGAAAAAGAAAGCCCCCGGCATGATGACCCTCATCGGCGTCGCCATCATT
GTCGCGTATACCTACAGCAGTGCCGTGGTGTTCGGCCTTCCCGGAAAGGTCTTTTTCTGGGAACTGGCCACCCTGATCGA
CATCATGCTTCTGGGGCACTGGATTGAGATGCGGAGCGTCATGGGCGCCTCCGGCGCGCTGGAAGAACTGGTCAAACTGA
TTCCGTCAAAGGCCCACCGCCTCAAATCGGATGGCGAAACAGAAGAAGTGCCCGTATCCGGGCTTGAAAAGGACGACCGC
GTGGCGGTCAAACCCGGTGAAAAGGTTCCCGTGGACGGCGAGATCGTAAATGGCCGCACCAGCATTGACGAGTCCATGAT
TACCGGCGAAAGCAAACACGTGGAAAAAGGAGAAGGGGATACCGTCATCGGGGGGAGTATCAACGGCGAGTCCGCTATTA
CGGTCGCCGTGCAGAAAACCGGGGATGACACCTATCTCTCCCAGGTGGTGGAGATGGTCAGGCAGGCCCAGGAATCCGGA
TCCAAAGCCCAGGGCACGGCGGACCGGGCCGCATTCTGGCTGACGATTGTCGCCCTTACCGCCGGGGCCGTAACCCTGGC
CGCATGGCTTATCGCGGGGAGGGAATTCGTCTTTTCCCTGGAGCGGATGGTGACGGTGATGGTTATCACCTGCCCCCATG
CCCTGGGCCTGGCCGTGCCCCTTGTGGTGGCCGTATCCACGGCCATTGCCGCAAAAAAGGGGCTGCTGATAAGAGACCGT
ACGGCCTTTGAGGCGGCACGGAATCTCGATGTCATCGTGTTCGACAAAACCGGCACCCTGACCGAAGGGCGGTTCGGCGT
ATCCGCGGTGGTTTCCCTGGGAGACCGTTCAGAGGATGATATCCTCCGGCTGGCCGCGGGACTGGAAAGCCGGTCTGAAC
ATTCCATAGCCGCCGGCATTGTTGAAGCAGCGAAAAAAAAGGAACTACACGTTGCCGGGCCTGAAAACTTCAAGGCAATT
CCAGGGAAGGGGGCCGAAGGGACTGTTGAGGATCTCGCTGTTAAGGTGGTCAGCCCCGGTTATCTCAAAGACAACGGGAT
CGACGTTCAAAACCAACGGGTGAATGAACTTGCCGAAAAAGGCAACACCGTGGTGTATCTGCTGGTGGACGACCGGCCCG
AAGGCGCGCTGGCCATGGAAGATATAGTGCGGCAATCTTCGAAGGACGCGGTTCATCGTTTAAAGGAGATGGGGCTTCAG
GTCATGATGCTGACCGGTGACTCCCGGGCCGTGGCTGAATCTGTTGCTGGAGAACTGGGGCTGGATGACTATTTTGCCGA
TGTGCTGCCCGACCAGAAGTCCACCCGTATTAAAGAAATCAGGAAAAAAGGACTGCGGGTGGCCATGGTGGGCGACGGCA
TCAATGATGCGCCGGCGCTTGCCGAAGCGGATGTGGGTATCGCCATCGGCGCGGGAACGGATGTGGCCATGGAAACCGCC
GATATCGTGCTGGTCCGTTCCGATCCCAGGGATGTCATCCATGTTATTGAACTCTCGGGGGCGACCCACTCGAAAACGGT
GCAGAATCTCTGGTGGGCGGCGGGTTACAATATTATCGCCATTCCGCTTGCGGCCGGTATCCTATATCCGTTCTTCCGGT
TTCTGCTGCCGCCGTCGGCTGGGGCCGTTGTCATGTCTCTGTCCACGGTGATCGTGGCAGTGAACGCAAGGCTGCTAAAA
GAGTGA

Protein sequence :
MTRADEKHSGDKDAAVDDHASPHGGGADHHHDQGEDGGRGHGNHDHHARHQKEGNGTHQDHRQHGAHQGHQDHHAHMVAD
FRRRFWIALVLSVPIVLLAPLIQGALGVKGKWDFPGDALVQFGFATVVFFYGGWPFLKGLADELKKKAPGMMTLIGVAII
VAYTYSSAVVFGLPGKVFFWELATLIDIMLLGHWIEMRSVMGASGALEELVKLIPSKAHRLKSDGETEEVPVSGLEKDDR
VAVKPGEKVPVDGEIVNGRTSIDESMITGESKHVEKGEGDTVIGGSINGESAITVAVQKTGDDTYLSQVVEMVRQAQESG
SKAQGTADRAAFWLTIVALTAGAVTLAAWLIAGREFVFSLERMVTVMVITCPHALGLAVPLVVAVSTAIAAKKGLLIRDR
TAFEAARNLDVIVFDKTGTLTEGRFGVSAVVSLGDRSEDDILRLAAGLESRSEHSIAAGIVEAAKKKELHVAGPENFKAI
PGKGAEGTVEDLAVKVVSPGYLKDNGIDVQNQRVNELAEKGNTVVYLLVDDRPEGALAMEDIVRQSSKDAVHRLKEMGLQ
VMMLTGDSRAVAESVAGELGLDDYFADVLPDQKSTRIKEIRKKGLRVAMVGDGINDAPALAEADVGIAIGAGTDVAMETA
DIVLVRSDPRDVIHVIELSGATHSKTVQNLWWAAGYNIIAIPLAAGILYPFFRFLLPPSAGAVVMSLSTVIVAVNARLLK
E

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0105 YP_252020.1 hypothetical protein Not tested SCCmec Protein 2e-101 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dole_2801 YP_001530681.1 copper-translocating P-type ATPase BAC0629 Protein 1e-176 61
Dole_2801 YP_001530681.1 copper-translocating P-type ATPase BAC0079 Protein 9e-137 47
Dole_2801 YP_001530681.1 copper-translocating P-type ATPase BAC0383 Protein 5e-102 42
Dole_2801 YP_001530681.1 copper-translocating P-type ATPase BAC0101 Protein 2e-81 41