Gene Information

Name : Dole_2696 (Dole_2696)
Accession : YP_001530576.1
Strain : Desulfococcus oleovorans Hxd3
Genome accession: NC_009943
Putative virulence/resistance : Virulence
Product : ATPase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3248071 - 3250659 bp
Length : 2589 bp
Strand : -
Note : PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: pth:PTH_2122 ATPase with chaperone activity, ATP-binding subunit

DNA sequence :
ATGCGTTTTGATAAACTCACCATAAAAGCACAGGAACTGTTGCAGGCGGCCCAGTCCGATGCCGGCGCCCGGGGTCACCA
GCAGATCGAACCCGAGCACCTGCTTTTTGCCATGCTGGAGGAGAATACCGGTATCGTGGCCTCCATGCTGGGTAAACACG
GCGCGTCCGTGGACGCCGTCCGCCGGGACACGGCCGAAGCCCTGGAGGCCATGCCAAAGATTTCCGGCGCGGCCGCCGAG
GTTTATATCTCCCGGCGGGCAAAGGCGGTCCTGGATGTCGCCTTTGCTCAGGCCGCGTCCATGAAGGACGAGTATGTGAG
CGTGGACCACCTCTTTCTCGCCCTGCTGGATGAAAAGGGGGGCAAGGCCGCCTCCATCTTAAAGCAGCACGGTGTCACCA
AAGACGCCATGCTAAAGGCCCTGCTCGACATTCGGGGCAATCAGCGGGTAACAGACCAGAACCCGGAAGAAAAATACAAA
GCCCTTGAAAAGTACAGCCGGGATCTTACTGAACTGGCCCGGCAGGGCAAGCTGGACCCGGTCATCGGCCGGGACGAGGA
GATTCGCCGCATTGTCCAGGTGCTCTCCCGCCGGACCAAGAACAATCCGGTGCTTATCGGCGAGCCGGGCGTGGGTAAAA
CCGCCATTGTCGAGGGGCTGGCCCAGCGCATCGTGGCCGGAGATGTATCAGAGGGCCTGAAAAACAAGCGCATCGTGGCT
CTGGATATGGCTTCCCTGATCGCGGGCGCCAAGTACCGGGGCGAGTTTGAAGATCGGCTCAAGGCCGTGCTCAAGGAAGT
GGAGCGGGCCGAGGGCAGCATCATCCTGTTCATTGATGAGCTGCACACCCTGGTGGGCGCCGGTGCCAGCGAAGGGGCCA
TGGACGCCTCCAACATGCTTAAGCCGGCCCTGGCCCGGGGGTCGCTGCGGTGCGTGGGCGCCACCACCCTGGACGAATAC
CGCAAGTACATTGAAAAAGACGCGGCCCTGGAGCGGCGGTTTCAGCCGGTGTTTACCGGTGAGCCCGACGTGACCGACAC
CATCTCCATTTTGCGGGGATTAAAAGAAAAGTACGAGGTGCATCACGGGGTCAAGATAAAGGACGCCGCCCTGGTGGCGG
CGGCCACCCTGTCCGACCGCTACATCACCGACCGGTTTCTGCCGGACAAGGCCATCGACCTGGTGGATGAGTGCGCCTCC
AAGATGCGTATCGAAATTGACAGCATGCCGGCCGAGATTGACGAGATTCACCGAAAGATCGTTCAGTCCGAAATTGAAAA
AGAGGCCCTGAAAAAAGAGTCGGACAAAGAATCCAGGAAACGGCTGGGCGCCCTGGAAGAGGAATTGGCCCGGCTCAAGG
AGGACCATGCCGAACTAAAAGCCCACTGGGACCGGGAAAAGGGCATGATCCAGACCATTCGGGGCATTAAAAAGGAGATC
GAGGAGCTGGGCGTGGCCCAGCAGCAGGCCGAGCGCCAGGGCGACTTTGCAAAAGCCGCCGAGATTCGATACGGCAAGAG
TGTGGAACTCAACAAAAAACTGGAAGCAACCGAAAAAGAGCTGGCCGCGTTTCAGGCCGACAAAAAAATGCTCAAGGAAG
AGGTGGACGCCGAAGACATTGCCGAGGTGGTGTCCCGGTGGACCGGCATTCCGGTCAGCAAGATGATGGAGGGCGAACGG
GAAAAGCTGGTGCACATGGAAGATCGGCTGGCCCTGCGCGTGGTGGGGCAAAACGAGGCCGTATCCGCTGTGTCCGACGC
GGTGCGCCGGTCCCGGTCCGGGCTTCAGGACCCCAACCGGCCCATCGGTTCCTTTATCTTTCTGGGTCCCACCGGCGTGG
GCAAGACCGAGCTGGCCAAGGCCCTGGCCGAGTTTCTGTTCGACAGTGAGCAGGTGATCCGGGTCGACATGTCCGAATAC
ATGGAAAAGCACGCCGTGGCCCGTCTCATCGGCGCGCCTCCGGGATACGTGGGGTATGAAGAGGGCGGGTACCTCACCGA
AAGCGTGCGGCGAAGGCCCTATTCCGTGGTCCTGTTTGATGAGATCGAAAAGGCCCATCCGGATGTGTTTAACATCCTTT
TACAACTGCTCGACGACGGCCGCATGACCGACGGCCACGGCCGGACCGTGGATTTCAAGAACACCATCGTGATCATGACC
TCCAACGTCGGCAGCCACTTGATCCAGGAGATGTCCCGGGCCAACGAAGACCCCGACCAGGTCAAAGAGCAGATCACCGA
CGTGCTGCGCCAGAACTTCAAGCCCGAGTTCTTGAACCGCATCGACGAAATCATCGTGTTCCATAACCTGGACCGGGACC
AGATCGCGAAAATTGTGGAAATCCAGGTGCAGCGGCTGGGAAAGCGTACGGCCGAACGGGGCGTTTCCATTGTGCTGTCC
GACGCGGCCAAACGGTTTATCGCGGAAAAGGGCTACGACCCGGTGTACGGTGCCCGGCCCTTGAAGCGCATGATTCAGAA
GCACATTGAAAACCCGCTGGCCATGGAGATATTAAAAGGCAACATTCCGGAAAACAGCACCATTTCCGTGGATGTGGAAG
GCGACGGGATTGTCTTCAGGCAGGCGTAG

Protein sequence :
MRFDKLTIKAQELLQAAQSDAGARGHQQIEPEHLLFAMLEENTGIVASMLGKHGASVDAVRRDTAEALEAMPKISGAAAE
VYISRRAKAVLDVAFAQAASMKDEYVSVDHLFLALLDEKGGKAASILKQHGVTKDAMLKALLDIRGNQRVTDQNPEEKYK
ALEKYSRDLTELARQGKLDPVIGRDEEIRRIVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIVAGDVSEGLKNKRIVA
LDMASLIAGAKYRGEFEDRLKAVLKEVERAEGSIILFIDELHTLVGAGASEGAMDASNMLKPALARGSLRCVGATTLDEY
RKYIEKDAALERRFQPVFTGEPDVTDTISILRGLKEKYEVHHGVKIKDAALVAAATLSDRYITDRFLPDKAIDLVDECAS
KMRIEIDSMPAEIDEIHRKIVQSEIEKEALKKESDKESRKRLGALEEELARLKEDHAELKAHWDREKGMIQTIRGIKKEI
EELGVAQQQAERQGDFAKAAEIRYGKSVELNKKLEATEKELAAFQADKKMLKEEVDAEDIAEVVSRWTGIPVSKMMEGER
EKLVHMEDRLALRVVGQNEAVSAVSDAVRRSRSGLQDPNRPIGSFIFLGPTGVGKTELAKALAEFLFDSEQVIRVDMSEY
MEKHAVARLIGAPPGYVGYEEGGYLTESVRRRPYSVVLFDEIEKAHPDVFNILLQLLDDGRMTDGHGRTVDFKNTIVIMT
SNVGSHLIQEMSRANEDPDQVKEQITDVLRQNFKPEFLNRIDEIIVFHNLDRDQIAKIVEIQVQRLGKRTAERGVSIVLS
DAAKRFIAEKGYDPVYGARPLKRMIQKHIENPLAMEILKGNIPENSTISVDVEGDGIVFRQA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec27 YP_851418.1 ATPase Not tested PAI II APEC-O1 Protein 4e-104 42
aec27 AAQ96721.1 Aec27 Not tested AGI-1 Protein 3e-104 42
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 4e-106 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dole_2696 YP_001530576.1 ATPase VFG2076 Protein 4e-105 41