Gene Information

Name : Dole_1674 (Dole_1674)
Accession : YP_001529555.1
Strain : Desulfococcus oleovorans Hxd3
Genome accession: NC_009943
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1991142 - 1992035 bp
Length : 894 bp
Strand : +
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sat:SYN_00952 integrase/recombinase

DNA sequence :
ATGAGTGCCACGGAACGCCTTGTGGACCAGTACATGAGCTACCTGCTGATCGAAAAGGGGCTGGCGGAAAACAGCCTGGA
AGCCTACGGCAGCGACCTGGCCGCTTACCTGGATTACTTAAAGGCGCAGAACATTGACCGCGTGTCTGAAACCGACATGC
CGGTTCTCCTAAAGTATCTGATTTTCCTGCGTGACAGGGGTCTCAATAAACGGTCCCGGTCCCGTCACCTGGTGACTCTG
CGCGGGTTTTACCGGTACCTGGCCCAGGAAAAGGTGCTGGCCTTCAGCCCGGCCGAGACCATCGACCTGCCCAAAAAGGG
GTTGCGGCTGCCTGACGTGTTGAGCGTGGACGAGGTGAAAAAGCTGCTGGCCGCGCCCGACACCACCACGGCCCGTGGCA
TGCGGGACGCGGCCATGATCGAACTGATGTATGCCGCCGGCCTTCGGGTGTCTGAACTGGTGGCCATGAAGGTACAGGAC
GTGAACACCGAGGTCTGTTTTGTCCGGGTGTTCGGCAAGGGGGCAAAGGAGCGGGTGGTGCCCATGGGCGCCTATGCAAA
GGAGAAACTGGAGGCCTATCTGTCGGGCGCCCGGCCCGCGCTTTTGAAAAACTATGCCAGTCTTTTTCTGTTTGTGGCGT
GGCGGGGCCGGCCCATGACCCGCCAGGGATTCTGGAAGGCCCTGAAAAAATACGGGCTGGCCGCGGGCATTCGCAAGTCC
ATCAAACCCCATACCCTGCGCCACTCCTTTGCCAGCCATCTTCTGGAGGGCGGAGCCGACCTGCGCTCGGTCCAGATCAT
GCTGGGCCACTCCGATATCTCCACCACCCAGATTTATACCCATGTGACCTACCGCCATCTCAAAGACGCCCATGAAAAGT
TTCATCCCCGGTGA

Protein sequence :
MSATERLVDQYMSYLLIEKGLAENSLEAYGSDLAAYLDYLKAQNIDRVSETDMPVLLKYLIFLRDRGLNKRSRSRHLVTL
RGFYRYLAQEKVLAFSPAETIDLPKKGLRLPDVLSVDEVKKLLAAPDTTTARGMRDAAMIELMYAAGLRVSELVAMKVQD
VNTEVCFVRVFGKGAKERVVPMGAYAKEKLEAYLSGARPALLKNYASLFLFVAWRGRPMTRQGFWKALKKYGLAAGIRKS
IKPHTLRHSFASHLLEGGADLRSVQIMLGHSDISTTQIYTHVTYRHLKDAHEKFHPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-52 44
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-52 44