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Name : Dole_0163 (Dole_0163) Accession : YP_001528050.1 Strain : Desulfococcus oleovorans Hxd3 Genome accession: NC_009943 Putative virulence/resistance : Unknown Product : RNA-binding S1 domain-containing protein Function : - COG functional category : K : Transcription COG ID : COG2183 EC number : - Position : 179699 - 181978 bp Length : 2280 bp Strand : + Note : PFAM: RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold; KEGG: sfu:Sfum_1838 RNA binding S1 domain protein DNA sequence : ATGATCCCTGCAACCGCTACGGCGCTGGGCATTAGCGAAAAACAGGTTCAGGCCGTGGCCGCCCTGCTGGAAGACGGTGC CACCATCCCCTTTATCGCCCGTTACCGCAAAGAGGCCACCGGCAGCCTGGATGAAGTGGCGGTTGCCCGGATTCGCGACA CCCTGCACCAGCTCAAGGAATTAGACGACCGGCGCCAGGCGGTTCTGGCGTCGCTTGAAAAAAACGGCCACCTGACCGAT GAATTAAAACAGCGGGTCCTGGCGGCAGACACCCTGACCGTGCTGGAAGACATCTATCTTCCCTTTCGGCCCAAGCGCCG GACCCGGGCCGTGATGGCCAGGGAAAAGGGCCTGGAGCCCCTGGCCCTGGTTCTTCTGGAACAAAAAGGGACAGACCCTC AGGCCGAAGCGTTGCCCTTTGTTGACCCGGAAAAGGGCGTGGCCTCGGTTGACGAGGCCCTGGCCGGGGCCCGGGACATT ATCGCGGAGATGACCAGTGAAGACGAGGCCGCCCGGTCGGCCCTGCGGGATCTGTTTTTCACCAAAGGCATGGTCTCGTG CCGGGTCGTGATGGGAATGGAGGAGGCCGGGGCCAAGTTTAGGGATTATTTTGACTGGAAAGAGCCGGTGGCCACGGTGC CGTCCCACCGCATGCTGGCCATGCGGCGCGGGGAAAAGGAAGGTTTTCTTGTTCTTGCCATCGCCCCGGAAGAGCCGGAC GCCATTGCCATTTTAGAGCGACTGTTTGTCAAAGGAGATACCGAAGACGCGGTCCAGGTGGCCCTGGCGGTAAAAGACAG CTACAAGCGGCTGCTCTCCCTTTCCATGGAAACCGAAACCCGCCTTGCTGCCAAAAAGAAAGCGGATGCCGAAGCCATCC GGATCTTTGCCGAAAACCTTCGCCAGCTCCTGCTGGCCCCGCCCCTGGGCGCGAAACGGGTGATGGGCATTGACCCGGGA TTCCGGACCGGCTGCAAGGTGGTCTGCCTGGACCGGCAGGGAAAGCTGCTCTGCTGGGACACGGTGTATCCCCATTTTTC CGAAGGCAGGGAGCAGGCGGCGGCGGACCGGATAAAGTCGCTGTGCGACCAGTTCGAGGTGGAGGCCATTGCCGTGGGCA ACGGCACCGCCGGCAGAGAGACCGAGGCGTTTGTAAAAGCCGTCGCTTTTTCCCGGCCGGTGCAGGTGGTCATGGTCAAT GAAAGCGGGGCCTCCATCTATTCGGCCTCCGAAGTGGCCAGAGAAGAGTTTCCGGACCATGACCTGACCGTGCGGGGAAG CGTTTCCATTGCCCGGCGCCTCATGGACCCTTTGGCCGAGCTGGTCAAGAGCGACCCTAAATCCATCGGCGTGGGCCAGT ATCAGCACGACGTAAGCCCCGCCGAATTAAAACAGTCCTTAGATGACGTGGTGGTCAGCTGCGTTAACCGCGTGGGCGTC GACCTGAACCGGGCCAGCGCCCAGCTGCTGACCTATGTATCGGGCCTGAATGCCGGCATCGCTAAAAACATCTTGGTCTA TCGGGAAGCAAACGGCCCGTTTGCCTCCCGGGAGGCATTAAAAGCCGTGCCGCGTTTCGGGCCCAAGACCTTTGAACAGA GCGCCGGTTTTCTGCGCATACCGGATGCGGCCAATCCCCTGGACGCCAGCGCGGTTCACCCGGAAAGCTATGCCATTGTC GAGGCCATGGCCAAAGACCTTGGCAAACAGGTGGCCGACATCATGCACCAGACGGACCTGCGTAAACAGGTCGACCTTTC CGCCTATGTCACCGGCACCGTGGGCCTGCCCACCCTGACCGACATTCTGGACGAACTGGCCAAGCCGGGCCGTGATCCCC GGCAGGCCTTTGAGTCGGTCTCTTTTATCGAAGGAATCAACACCATTGATGACGTGCAGCCGGGCATGAAACTGCCGGGC ATTGTCACCAACATCACGGCTTTCGGTGCCTTTGTGGACATCGGCGTGCACCAGGACGGGCTGGTCCATATCAGCCAGAT GGCGGACCGGTTTGTCAAATCTCCGGCAGACATCGTCAAGGTCCAGCAGCGGGTTATGGTCACGGTGCTGGAAGTGGACA AGGAGAGAAAGCGGATCAGCCTCTCCATGAAAGCCGAACGCCCGGCGCCCACGGCGGCCCGGGAGGAGACCGCGGGACCC TCTCCCAGGCCCGACACCCCGGGCAAGGCAAAAGGGAAAAAGCCGGAGAAAAAAGAGAAGAGAAATATCCCCGCCAATTC GGCCCTGGCCGAAGCCTTGCGAAAAAGCGGCCTGACCTGA Protein sequence : MIPATATALGISEKQVQAVAALLEDGATIPFIARYRKEATGSLDEVAVARIRDTLHQLKELDDRRQAVLASLEKNGHLTD ELKQRVLAADTLTVLEDIYLPFRPKRRTRAVMAREKGLEPLALVLLEQKGTDPQAEALPFVDPEKGVASVDEALAGARDI IAEMTSEDEAARSALRDLFFTKGMVSCRVVMGMEEAGAKFRDYFDWKEPVATVPSHRMLAMRRGEKEGFLVLAIAPEEPD AIAILERLFVKGDTEDAVQVALAVKDSYKRLLSLSMETETRLAAKKKADAEAIRIFAENLRQLLLAPPLGAKRVMGIDPG FRTGCKVVCLDRQGKLLCWDTVYPHFSEGREQAAADRIKSLCDQFEVEAIAVGNGTAGRETEAFVKAVAFSRPVQVVMVN ESGASIYSASEVAREEFPDHDLTVRGSVSIARRLMDPLAELVKSDPKSIGVGQYQHDVSPAELKQSLDDVVVSCVNRVGV DLNRASAQLLTYVSGLNAGIAKNILVYREANGPFASREALKAVPRFGPKTFEQSAGFLRIPDAANPLDASAVHPESYAIV EAMAKDLGKQVADIMHQTDLRKQVDLSAYVTGTVGLPTLTDILDELAKPGRDPRQAFESVSFIEGINTIDDVQPGMKLPG IVTNITAFGAFVDIGVHQDGLVHISQMADRFVKSPADIVKVQQRVMVTVLEVDKERKRISLSMKAERPAPTAAREETAGP SPRPDTPGKAKGKKPEKKEKRNIPANSALAEALRKSGLT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| NMB0075 | NP_273139.1 | transcriptional accessory protein Tex | Not tested | IHT-A | Protein | 4e-152 | 49 |
