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Name : Dole_1126 (Dole_1126) Accession : YP_001529010.1 Strain : Desulfococcus oleovorans Hxd3 Genome accession: NC_009943 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1335747 - 1338392 bp Length : 2646 bp Strand : + Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGGCTTCCACAGGCGCCACTCCCATGATGCAGCAGTATCTCTCCATCAAGGAGCAGCACCGGGACGCCATTCTTTTTTA CCGAATGGGCGACTTTTACGAGATGTTTTTTGAGGACGCTCAAACCGCGGCCCCGGTCCTTGAGATCGCTCTGACCTCCC GCAACAAGAACGACACCGATCCCATTCCCATGTGCGGTGTGCCGGTAAAGGCCGCGGACGGCTATATCGGCCGGCTCATC GAAAACGGGTTCAAGGTGGCGGTATGCGAGCAGACCGAGGACCCTGCCGCGGCCAAAGGCCTGGTCCGGCGGGACGTGGT GCGCATCGTCACTCCGGGCATGATCATCGACAATGCTCTGCTGGAAAAGGGAACCAATAACTACGTTGTCTGCCTGGCCC ATGCCGACGGTGTTGTGGGGTTTGCCAGCGTGGATATCTCCACCGGCACTTTTCGGGTGTGCGAGTCCTCCGACCTGCGG GCCGTGCGCCACGAGCTGCTGCGCATCGCGCCCCGGGAAGTGGTAATACCGGAATCCGGCGCCGATGACGCGGCGCTTTC GCCCTTTGTTTCCCTTTTTCCGCCGGCCATTCGAACAACGCTCGCTAACCGGGAGTTTGATTACAGAACCGCCTGCCAGC GGCTGACCGACCAGTTTCAGACCCGGTCCCTGGAGGGGTTCGGGTGCCGGGGCCTCAAACCCGGCATTGTCGCGGCCGGG GCCCTGCTTTCCTATGTAAACGATACCCAGAGACAGAAGGCGTCCCACCTGACCGGGCTGGAGGTCTACAGCATCGACCA GTACCTGCTGATGGACGAGGTGACCTGCCGGAATCTGGAACTGGTGGCCAACCTTCGCAACAATGGCAGGCAGGGAACCC TTATTGATGTGCTGGACGCCTGCGTCACCGCCATGGGCAGCCGCCTGCTGCGGCGCTGGATGCTCTATCCCCTGCTGTCG GCAGAAGCCATCAACCGGCGGCTGGACGCGGTGGCAGAGGCCAAAGAGGGCCTGGGCACTCGAAAGGCGGTGCGGGAACT GCTCAAACAGGTCTACGATATCGAGCGGCTTACCAGCCGGGCCGTTATGGGCCGGGTCACCCCTCGGGACCTGCTGGCCT TGAAACAGACCCTTTTCGCCCTGCCGGGTCTGGCAACAGAACTGAAGTCTTTTGACAGCCCTTTTTTCTCCTTTGCCGGG GAACCGGGGCCCGAAGGCCTTGATAAGCTGGCCGGCCTGGCCGATCTGCTGAAGGCGGCGGTGCGGGAGGACGCGCCGGT TTCCATCGCTGACGGCGGTGTCATCAACCCCGACTATCATCCCCGGCTGGCCGAACTGGTAACCATCAGCCGGGACGGCA AGAGCAGCCTGGCCCGGCTGGAGGCAACGGAAAAAGAGAAGACCGGCATTTCCACCCTCAAGGTGCGGTACAACAAGGTG TTTGGTTACTATATCGAGGTACCCCGGTCCCAGGTGGGGGCCGTGCCGGCTCACTACGTTCGCAAGCAGACCCTTGTCAA CGGTGAGCGCTACATCACCGACGAGCTTAAGGTGTTTGAGGAAAAAGCCCTGGGCGCCGAAGAACAGCGCGTTCGGCTGG AGCAGGAGTTGTTTGCCGATATCGTGGGCCGGGTGACCGCGTGCAGCCCGATGCTGTTTGCCGTGGCCCGGGTCGCGGCC GGAATCGACGTGTTGTGCGCCCTGGCCCAGGTGGCCGATGACCATGACTATGTCCGGCCCGAGATGCTGTCCGGCGGCGA GATCATCATTGAAGAGGGCCGTCATCCCGTGGTGGAGCGCATGCTTTCCGGCGAACGGTACGTGCCCAACAGCATTACGT TAAACGATACCGACCGGCAGCTGCTGATCATCACCGGTCCCAACATGGCGGGCAAATCCACGGTGCTGCGCAAGGTGGCG CTGTTTTCGGTCATGGCCCAGATGGGCTCCTTTGTACCGGCCCGGCGGGCCGCCATGGGTGTGGTGGACCGGCTCTTTAC CCGGGTGGGGGCCCTGGACAACCTGGCCTCAGGCCAGAGTACCTTCATGGTGGAGATGGAAGAGACGGCCAACATCATCA ACAACGCCACGCCGAAAAGCCTGGTGGTGATCGACGAGATCGGCCGGGGCACCAGCACCTACGACGGCCTGAGCATTGCC TGGGCCGTGGCCGAGGCCCTGCATGATCTGCACGGCAGAGGGGTCAAGACCCTGTTTGCCACCCATTACCACGAGCTGAC CGAACTGGAAAACACCCGGCCCCGGGTGAAGAACTTTCATATTGCCGTCAAGGAGTGGAACGATACCATCATTTTTTTAA GAAAGCTGGTGGAGGGCAGCACCAACCGCAGCTACGGCATTCAGGTGGCAAGGCTGGCCGGCATTCCCGGCCCGGTGATC GCCAGGGCCAAGAAGATTCTGCTGGACATCGAGCAGGGCACCTACAGTTTTGAGGCAAAGTCCGGCACTGCTCCGGGCAC CGGACAGAGCGGCCCGGTTCAGCTCTCCCTGTTTACCCCGCCGGAACAGATGCTGGTGGACCGGCTTCAAAAGGTCGACA TTTCAACCATGACGCCCCTGGAGGCATTGAACTGCCTTCACGAACTGCAACAGAAGGCGCACGCCATATCGGAGACCGAC GGATGA Protein sequence : MASTGATPMMQQYLSIKEQHRDAILFYRMGDFYEMFFEDAQTAAPVLEIALTSRNKNDTDPIPMCGVPVKAADGYIGRLI ENGFKVAVCEQTEDPAAAKGLVRRDVVRIVTPGMIIDNALLEKGTNNYVVCLAHADGVVGFASVDISTGTFRVCESSDLR AVRHELLRIAPREVVIPESGADDAALSPFVSLFPPAIRTTLANREFDYRTACQRLTDQFQTRSLEGFGCRGLKPGIVAAG ALLSYVNDTQRQKASHLTGLEVYSIDQYLLMDEVTCRNLELVANLRNNGRQGTLIDVLDACVTAMGSRLLRRWMLYPLLS AEAINRRLDAVAEAKEGLGTRKAVRELLKQVYDIERLTSRAVMGRVTPRDLLALKQTLFALPGLATELKSFDSPFFSFAG EPGPEGLDKLAGLADLLKAAVREDAPVSIADGGVINPDYHPRLAELVTISRDGKSSLARLEATEKEKTGISTLKVRYNKV FGYYIEVPRSQVGAVPAHYVRKQTLVNGERYITDELKVFEEKALGAEEQRVRLEQELFADIVGRVTACSPMLFAVARVAA GIDVLCALAQVADDHDYVRPEMLSGGEIIIEEGRHPVVERMLSGERYVPNSITLNDTDRQLLIITGPNMAGKSTVLRKVA LFSVMAQMGSFVPARRAAMGVVDRLFTRVGALDNLASGQSTFMVEMEETANIINNATPKSLVVIDEIGRGTSTYDGLSIA WAVAEALHDLHGRGVKTLFATHYHELTELENTRPRVKNFHIAVKEWNDTIIFLRKLVEGSTNRSYGIQVARLAGIPGPVI ARAKKILLDIEQGTYSFEAKSGTAPGTGQSGPVQLSLFTPPEQMLVDRLQKVDISTMTPLEALNCLHELQQKAHAISETD G |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 2e-142 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dole_1126 | YP_001529010.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 6e-153 | 42 |
