Gene Information

Name : AZC_3237 (AZC_3237)
Accession : YP_001526153.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Virulence
Product : cobalamin ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 3732235 - 3733068 bp
Length : 834 bp
Strand : -
Note : Fe3+-siderophores transporters, ATPase components

DNA sequence :
ATGACGTTGAAATTCTCTTCCGAGTTCGTCTCCGAGTGCACCTTGCCACCGGATGGCGATGACCCGCTGTTCCAACTGGA
GAATGCCGGCTTTGCTGTAGCCGGGCGCGATCTCGTTCGCGCGGTTTCGATCAGGCTGGCGGCCCGGCGGGTGGTGGCTC
TGATCGGCCATAACGGCTCCGGCAAGTCGACGCTGATCAAGATGCTTGCCGGCCAGTTGGTCCCAACGTCTGGCCGCGTG
TGCCTGGCCGGTCGGCCGGTGCCTGAGTGGAGCGCCCGGGCCTTCGCGCGCAAGGTCGCCTATCTTCCGCAGCAGATTCC
CGTGGCGGACGGCATGCTGGTGCGTGAGCTGGTGTCACTGGGCCGCTACCCCTGGCATGGCGCGCTGGGCCGGTTCGGGA
CAGAGGACCGGAGGAAGGTTGATGAGGCGCTCGTCCTCACGGGCATGGACGGGTTGTGTGAGCGGCAGATCGAGACGCTT
TCGGGGGGAGAGCGGCAGAGGGCTTGGATCGCGATGTTGATCGCTCAGGATGCCGAATGCCTGCTCCTCGACGAACCCAC
ATCCGCGCTCGATATCGCTCATCAGATTGAGGTGCTCGGCCTCGTGCGGACTCTGGCGCGCCAGCGCCAGCTCGGCGTGG
TTGTTGTTCTACATGACGTGAACATGGCAAGCCGATTTTGCGATGAGATCGTCGCCATGAAGAGTGGTGAAATGATCGTT
CGAGGCCGACCTGAAGACATCATGCAGCCGGACCTGTTGAAGATGATCTATGGCGTGGACATGACTGTGGTGCAGCATCC
CGGGTCCGGGGCAAGCGTCTGCATCGTGGATTAG

Protein sequence :
MTLKFSSEFVSECTLPPDGDDPLFQLENAGFAVAGRDLVRAVSIRLAARRVVALIGHNGSGKSTLIKMLAGQLVPTSGRV
CLAGRPVPEWSARAFARKVAYLPQQIPVADGMLVRELVSLGRYPWHGALGRFGTEDRRKVDEALVLTGMDGLCERQIETL
SGGERQRAWIAMLIAQDAECLLLDEPTSALDIAHQIEVLGLVRTLARQRQLGVVVVLHDVNMASRFCDEIVAMKSGEMIV
RGRPEDIMQPDLLKMIYGVDMTVVQHPGSGASVCIVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 3e-47 43
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 42
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 42
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 42
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-48 42
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 9e-43 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_3237 YP_001526153.1 cobalamin ABC transporter BAC0164 Protein 5e-43 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_3237 YP_001526153.1 cobalamin ABC transporter VFG1042 Protein 5e-43 41