Gene Information

Name : AZC_1953 (AZC_1953)
Accession : YP_001524869.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2254233 - 2254895 bp
Length : 663 bp
Strand : +
Note : transcriptional regulatory protein, C-terminal

DNA sequence : 
ATGCGCATCCTGCTGGTCGAGGACACCGAAGAGATCGGCCGCGCCATCGCGAAGCGGTTCGAGCGCATTGGTTACGCGGT
GGACTGGGAGCGCGACGGGCGCACCGCGGCCGAGCTTCTGGAAGTGCAAAGCTATGATCTCGTTGTGCTGGACGTGATGC
TGCCTCGGCAGGATGGGTTCAGCGTTCTCAAGGGGTTGCGCGGGCGTGGGGTGCGCACGCCGGTGCTGGTGCTCACCGCC
CGGTCCGCCGTCGACGACCGCATCAGCGCCCTCGATCTCGGCGCCGATGACTATCTGATCAAGCCGTTCGATTATCGCGA
GCTGGAAGCCCGCGCCCGCGCGCTGCTGCGCCGGGCGGCGGGCCAGTCGGACAATCTGCTGCGGCTTGGCCCGTTGACCA
TCGACCGGGCCGGCCGCACCGCAAGCGTCGAGGGCAAGGCGCTCGACCTGACCCGGCGCGAGCTGACCGTTCTGGAAATC
CTCGCCTCCCGCCCCGGCCGGTTCGTGCCGAAGGAAGAATTGGTGGAGCAGCTCTTCAGCTTCGATCAGGACCCGAGCCC
CAATGCCGTGGAGCAGTTCGTGGCGCGCCTGCGCCGCAAGCTTGCCGCGACGCCAGTCGAGATCCGGACAGAGCGCGGCC
TTGGCTATCAGCTCGCGACTTGA

Protein sequence : 
MRILLVEDTEEIGRAIAKRFERIGYAVDWERDGRTAAELLEVQSYDLVVLDVMLPRQDGFSVLKGLRGRGVRTPVLVLTA
RSAVDDRISALDLGADDYLIKPFDYRELEARARALLRRAAGQSDNLLRLGPLTIDRAGRTASVEGKALDLTRRELTVLEI
LASRPGRFVPKEELVEQLFSFDQDPSPNAVEQFVARLRRKLAATPVEIRTERGLGYQLAT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 6e-29 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1953 YP_001524869.1 response regulator receiver BAC0197 Protein 1e-31 42
AZC_1953 YP_001524869.1 response regulator receiver BAC0308 Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1953 YP_001524869.1 response regulator receiver VFG0473 Protein 1e-26 41