Gene Information

Name : AZC_1725 (AZC_1725)
Accession : YP_001524641.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Resistance
Product : helicase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG1200
EC number : -
Position : 1973455 - 1975551 bp
Length : 2097 bp
Strand : -
Note : C-terminal:DEAD/DEAH box helicase, N-terminal

DNA sequence :
ATGCGCCCGGCTTTGCTCGATCCGCTTTTCGCCCCCCTCACCACGCTTCCCGGCATCGGGCCGAAGATGGTGCGCCCGTT
CGGGCGGCTGCTGGGGCGGGAAAATCCGCGCGTCATCGACCTCCTCTTCCACATGCCCTCCGGCCTCATCGACCGCCGGG
CGCGGCCGACCATCTTCGAGGCCGAGCCGGAAACGGACGTGACGCTGGAAGTGCGCGTGGACGGCCACAGCGCCCCGCCC
CCCGGCCGGCGCGCGCCGCATCGGACCTTCGTTTCGGACGCCAGCGGCGACCTGACGGTGGTCCATTTCAACATCGAACG
CGCCCGCATCGAGCGCCTGCTGCCCGTGGGCGAGACGCGCTGGCTGTGCGGGCGCGTGACGCTCTATGACGGCATGCGGC
AGATGACCCATCCCGACCGCATCCTCGATGCGGCAGGCCTCGCCAAGCTGCCGCCGGTGGAACCTAAATATCCGCTGACC
GAAGGCCTCGCCGGCGGCCATGTGCGTCGCGCCATGGAGGCCGCGCTCGCCCGCGTGCCCGAGTTGCCGGAGGCCATTCC
GCCGGAGCTTCTGGAGCGGGGCGACTGGCCCTCCTTCCGCGAGGCTCTGAAGCGCATCCACCAGCCCGAGACCCCGGTGG
ACGGCCTGCCCACCGGCCGGGCCTGGGAGCGCCTCGCCTTCGATGAGCTCTATGCCCATCAGGTGACGCTCGCCCTCGTG
CGGCAGACGCAGGTGAAGGCCGGCGGGCGGCCGACGCGCGGCGACGGACGGCTCGCCGCCGCCATCCTCAAGGCCCTGCC
CTTCCGCCTCACCAGCGCGCAGGAAGAGGCGCTCGCCGCCATCCGCGCCGATCTTGCGGCGGACACGCGGATGCTGCGCC
TGCTGCAAGGCGACGTGGGCTCGGGCAAGACCGTGGTGGCGCTTCTGGCTGCCGCCGCAGCCATCGAGGCCGGCCGTCAG
GCGGCGCTGATGGCGCCCACCGAAATCCTCGCCCGCCAGCATCTGGAGACCATCGCGCCGCTGGCGGCCGCCGCCGGCAT
CGAGGTGGCGGTGCTCACCGGCCGCGAGAAGGGGCGCACCCGCGCCGGCATTCTGGAGGGGCTCGCCAGCGGGCGCATCG
GACTCGTTGTGGGCACGCACGCGCTCATTCAGGACGATGTGGCCTTCGCTGATCTTGCCCTCGCCATCGTGGACGAGCAG
CACCGTTTCGGCGTCGAGCAGCGCCTCACTTTCTCCCGCAAGGGGGCGGCGGTGGACATGCTGCTGATGACGGCAACGCC
CATCCCCCGCACCCTCGTCCTCACCCTGTTCGGCGACATGGACAGTTCCGAGCTGCGGGAGAAGCCGCCGGGCCGCAAGC
CGGTGGACACACGCTCCGTCTCGCTGGAGCGTCTGGACGAAGTGGTCGGCGCCCTCGGCCGACAGTTGCGCGACGGGGCA
CAGGCCTACTGGATCTGCCCGCTGGTGGAGGAAAGCGACACCTCGGACCTCGCCGCCGCCACCGAGCGCGCCGCACATCT
GAAGAAGGTGTTCGGCGAAAAGGCGGTGGAACTGGTGCACGGACGCATGTCCGGCGCCGACAAGGACGCCGCCATGGCAC
GCTTTGCCTCAGGCGAGGCGCGCATTCTCGTCGCCACCACGGTGGTGGAGGTGGGCGTCAACGTGCCCAACGCCACGCTC
ATGGTGATCGAGCATGCGGAGCGCTTCGGCCTCGCCCAGCTCCACCAGTTGCGCGGGCGCGTCGGGCGCGGCGAGAAGGC
CTCGACATGCCTGCTGCTCTTTCGCGGCCCCCTGAGCGAGACCTCCAAGGCCCGCCTCGCCATCCTGCGCGAGAGCGAGG
ACGGCTTCCGCATCGCCGAGGAAGACCTGCGCCTGCGCGGCGAGGGCGACGTGCTCGGCACCAAGCAGAGCGGCCTGCCC
GGCTTCAAGGTGGCGCGCATGGAGGTGCATGGCGCCCTCGTCTCGCAGGCCCGCGATGCCGCCGCGCGTCTGGTGCCCGG
CAATCCCGATCTCGAAGGCCCCGAAGGCGAACGGGTGCGCACGCTGCTCTATGTGCAGGAGCGCGATGCGGCGGTGCGCT
TGCTCTCGGCCGGCTAA

Protein sequence :
MRPALLDPLFAPLTTLPGIGPKMVRPFGRLLGRENPRVIDLLFHMPSGLIDRRARPTIFEAEPETDVTLEVRVDGHSAPP
PGRRAPHRTFVSDASGDLTVVHFNIERARIERLLPVGETRWLCGRVTLYDGMRQMTHPDRILDAAGLAKLPPVEPKYPLT
EGLAGGHVRRAMEAALARVPELPEAIPPELLERGDWPSFREALKRIHQPETPVDGLPTGRAWERLAFDELYAHQVTLALV
RQTQVKAGGRPTRGDGRLAAAILKALPFRLTSAQEEALAAIRADLAADTRMLRLLQGDVGSGKTVVALLAAAAAIEAGRQ
AALMAPTEILARQHLETIAPLAAAAGIEVAVLTGREKGRTRAGILEGLASGRIGLVVGTHALIQDDVAFADLALAIVDEQ
HRFGVEQRLTFSRKGAAVDMLLMTATPIPRTLVLTLFGDMDSSELREKPPGRKPVDTRSVSLERLDEVVGALGRQLRDGA
QAYWICPLVEESDTSDLAAATERAAHLKKVFGEKAVELVHGRMSGADKDAAMARFASGEARILVATTVVEVGVNVPNATL
MVIEHAERFGLAQLHQLRGRVGRGEKASTCLLLFRGPLSETSKARLAILRESEDGFRIAEEDLRLRGEGDVLGTKQSGLP
GFKVARMEVHGALVSQARDAAARLVPGNPDLEGPEGERVRTLLYVQERDAAVRLLSAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
recG CAJ77039.1 ATP-dependent DNA helicase Not tested AbaR1 Protein 3e-140 54

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1725 YP_001524641.1 helicase BAC0356 Protein 1e-89 43