Gene Information

Name : AZC_1653 (AZC_1653)
Accession : YP_001524569.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Virulence
Product : Fis-type protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG2204
EC number : -
Position : 1891800 - 1893182 bp
Length : 1383 bp
Strand : +
Note : helix-turn-helix

DNA sequence : 
ATGGCTCCCGCGATCCTGGTGGTCGATGACGAGAAGCGCCTCGGCGAAGTGCTCGCGGCGGCGCTGACGGAACGCGGATT
CGAGACGACGGCCGTGAGCAGCGCGGCGGCGGCACTCGCCTATTGCGAGGCCAATGCGGTTGATCTCGTGCTCACGGACC
TGCGGATGCCGGACCGCAGCGGGCGGGACCTGCTGCTCGCGCTGAAGGAAGGGCGGCCCGATCTGCCGGTCATCATCATG
ACCGCCTATGCCACGGTGCGCGGGGCCGTTGACCTCATCAAGGACGGCGCCTTCGATTATGTGGCGAAGCCCTTCGAGCT
CGATGACGTGGTCGCCACCATCGAGCGCGCGCTGAAGATCCGGGCGGTCGTCAACGAGAATGCCCGCCTCCGGATGGAGC
TGGAGGGCCGCTACTGCTTCGACAACCTCATCGGCGAGAGCGCGCCCTTCCGCAACGTGCTCCAGCAGGTGGGAGAGGTG
GCCCAGAGCCGGGCCAGCGTGCTGCTGCACGGAGAGAGCGGAACGGGCAAGGAACTGATCGCCCGCGCCATCCACTACAA
CAGCCCGCGCCGGGAGATGCCGTTCATCGCCGTGAACTGCGCGGCCATTCCCGAGACGCTGATCGAAAGCGAACTCTTCG
GTCATGTGAAGGGGGCCTTCACGGGTGCCACCAGCAATCGCGAGGGCCGCTTCAGCGCGGCCGACGGCGGCACGCTGTTC
CTCGACGAGATCGCCGATATGCCGCTCTCGGTGCAGGCCAAGGTGCTGCGGGCGGTTCAGGAGCAGAGCTTCGAGCCGGT
GGGCAGCAGCAAGCCCCTGAAGGTGGACGTGCGCATCATCGCCGCCTCCCACAAGGACCTCCAGAAGGCGATCGCCGACG
GCGCCTTCCGGATGGACCTGTATTACCGCCTCGCGGTCTTCCCCATCACCCTGCCACCGCTGCGCGAACGCCACGATGAT
ATTCCGCTGCTGGCGGCGCACTTTCTGCGCCGTGCGGCACAGGAGATGGGCAAGAAGATCGACGGCATCAGCCTGCCCGC
GCAGGAGGCGCTGGCCCATTATGGCTGGCCCGGCAACATCCGCGAACTCCAGAACTGCATGGAGCGGGCCGCCATCGTCG
CCCGCGGGCCGGTGATCGAGCCCAAGGATCTCATGCTGTTCGGCCCCGAAGCGCCGGGCGCATCGGCGCAGCGCGCGCTG
CCCTCGGACCTTGATGGGGAATTGGAACGCATCGAGCGCGAGTTTCTGCTAGAAGCCCTCAAGGAAAGCGGCGGCGTGCA
GGCGCGCGCGGCCGAGCGGCTCGGCATTACGGAGCGCAGCCTCTGGCATCGGGTCAAGAAGCTGGCGATCAAGGTGTCTC
GGGTGGCAGAGCCCCATGAATAA

Protein sequence : 
MAPAILVVDDEKRLGEVLAAALTERGFETTAVSSAAAALAYCEANAVDLVLTDLRMPDRSGRDLLLALKEGRPDLPVIIM
TAYATVRGAVDLIKDGAFDYVAKPFELDDVVATIERALKIRAVVNENARLRMELEGRYCFDNLIGESAPFRNVLQQVGEV
AQSRASVLLHGESGTGKELIARAIHYNSPRREMPFIAVNCAAIPETLIESELFGHVKGAFTGATSNREGRFSAADGGTLF
LDEIADMPLSVQAKVLRAVQEQSFEPVGSSKPLKVDVRIIAASHKDLQKAIADGAFRMDLYYRLAVFPITLPPLRERHDD
IPLLAAHFLRRAAQEMGKKIDGISLPAQEALAHYGWPGNIRELQNCMERAAIVARGPVIEPKDLMLFGPEAPGASAQRAL
PSDLDGELERIEREFLLEALKESGGVQARAAERLGITERSLWHRVKKLAIKVSRVAEPHE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 1e-59 42
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 1e-59 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1653 YP_001524569.1 Fis-type protein BAC0089 Protein 3e-86 46
AZC_1653 YP_001524569.1 Fis-type protein BAC0467 Protein 3e-82 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1653 YP_001524569.1 Fis-type protein VFG1214 Protein 1e-76 44
AZC_1653 YP_001524569.1 Fis-type protein VFG1249 Protein 3e-70 44
AZC_1653 YP_001524569.1 Fis-type protein VFG0116 Protein 7e-61 43