Gene Information

Name : AZC_1569 (AZC_1569)
Accession : YP_001524485.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1789511 - 1790197 bp
Length : 687 bp
Strand : +
Note : transcriptional regulatory protein, C-terminal

DNA sequence : 
ATGACCGATATTCGTATTCTGGTGGTGGATGACGAACCCGCCATCCATCGCTTCCTCAGCCCCGCCCTCACCGCCGCCGG
CTATGGCGTGGCGCGGGCGGACGATGCGGCGGGCGCGCTGCGCGCCATCGCCACCCATCCGCCGGATGCGGTGCTGCTCG
ATCTCGGCCTGCCGGACATGGACGGCAAGGAGGTGATCGGCCGCGTGCGCCAGTTCTCGCAGGTGCCCATCATCGTTCTT
TCGGCCCGCGACCGGGAGGCGGAGAAGATCGAGGCTTTGGACCTCGGGGCGGACGATTTCGTCAACAAGCCCTTCGGCGT
CGGCGAACTCATGGCGCGCATCCGCGCCGCCTTGCGCCAGCGCGGCGGCGATACCCACGCGGCGGATGTGGTGCTGAAGG
TGGGGCCACTGGAGATCGACCGGCCGCGCCATCGCGTCACTCGCGACGGGCAGGAAATCAAGCTGACGCCCAAGGAGTTC
GAGCTTCTGGTCTATCTCGCCCGCCATCCCGGCCGGGTGCTGACCCACCGGCAGATTCTCGGGGCCGTGTGGGGGCCGGC
CCATCTCGACGACACGCAATATCTGCGCGTCTATGTGGGCCAGTTGCGCCAGCGCCTGGAGGTGGAGCCGGCAACGCCCA
CGCTCATCCTCACCGAGCCGGGCATCGGCTATCGCATGGCGGAGTAG

Protein sequence : 
MTDIRILVVDDEPAIHRFLSPALTAAGYGVARADDAAGALRAIATHPPDAVLLDLGLPDMDGKEVIGRVRQFSQVPIIVL
SARDREAEKIEALDLGADDFVNKPFGVGELMARIRAALRQRGGDTHAADVVLKVGPLEIDRPRHRVTRDGQEIKLTPKEF
ELLVYLARHPGRVLTHRQILGAVWGPAHLDDTQYLRVYVGQLRQRLEVEPATPTLILTEPGIGYRMAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 6e-36 42
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 4e-36 42
SH0031 YP_251946.1 hypothetical protein Not tested SCCmec Protein 1e-31 42
kdpE BAA82188.1 KDP operon transcriptional regulatory protein KdpE Not tested Type-II SCCmec Protein 2e-31 42
kdpE YP_039536.1 response regulator protein Not tested Type-II SCCmec Protein 3e-31 42
kdpE NP_370594.1 transcriptional regulator kdpE Not tested Type-II SCCmec Protein 3e-31 42
kdpE NP_373306.1 hypothetical protein Not tested Type-II SCCmec Protein 3e-31 42
kdeP YP_190033.1 DNA-binding response regulator KdeP Not tested Type-II SCCmec Protein 3e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1569 YP_001524485.1 response regulator receiver AE000516.2.gene3505. Protein 3e-29 43
AZC_1569 YP_001524485.1 response regulator receiver NC_012469.1.7685629. Protein 3e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1569 YP_001524485.1 response regulator receiver VFG1390 Protein 4e-29 42
AZC_1569 YP_001524485.1 response regulator receiver VFG0473 Protein 4e-21 41