Gene Information

Name : AZC_1150 (AZC_1150)
Accession : YP_001524066.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Resistance
Product : periplasmic dipeptidase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2173
EC number : -
Position : 1283442 - 1284122 bp
Length : 681 bp
Strand : +
Note : D-ala-D-ala digestion in peptidoglycan

DNA sequence :
ATGGACACGGGCTCTCGAACGGGCTCTATGGAGCGCGGAGGTGCTTCCATGTCCGTGTCCGCCGAACCTGTCCTGCCTGC
GCTCTTCGTCGACGTCCCCGCAGTGGTCCCGAACGTGATCGTGGATCTGCGCTATGCCGGGCCGAACAATTTCGTCGGGG
TGCGGGTGGACGGGTATGAAGCCGAGCGGGCGCTGCTGACCCGGCCGGCGGCGGAAGCGGCCGCCCGCGTTGCCGAAGGG
CTGGCGCGGCAGGGATTGGTGCTGAAGCTGCTGGATTGCTATCGCCCCACGCGGGCCGTTGCGCATTTTGCCCGCTGGGC
CGCGGATACGAACGACCTCGGCACCAAGGCCGATTTCTATCCCGACCATGACAAGCCGGAGCTGTTCGATCTCGGCTATA
TCGCCGGCCGCTCCAGCCATTCGCGCGGCTCGACCCTCGACCTGACGCTGGCCCATGCCTCGGACGGCACCGAGCTCGAC
ATGGGCACGCCGTTCGACCTCTTCAGCGAGCGCTCCTGGCCGGCCTCGCTGGCGGTGACGGACGCGCAGCGCGACAACCG
CCGTCTGCTCGCTGCTGCCATGACGGACGCGGGCTTCGAGCCCTTCCTCATGGAATGGTGGCACTTCACCCTGAAGGGCG
AGCCGTTTCCCGACACCTATTTCGACGCGCCGATCCGCTGA

Protein sequence :
MDTGSRTGSMERGGASMSVSAEPVLPALFVDVPAVVPNVIVDLRYAGPNNFVGVRVDGYEAERALLTRPAAEAAARVAEG
LARQGLVLKLLDCYRPTRAVAHFARWAADTNDLGTKADFYPDHDKPELFDLGYIAGRSSHSRGSTLDLTLAHASDGTELD
MGTPFDLFSERSWPASLAVTDAQRDNRRLLAAAMTDAGFEPFLMEWWHFTLKGEPFPDTYFDAPIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 3e-29 45
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-29 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1150 YP_001524066.1 periplasmic dipeptidase U35369.1.gene7.p01 Protein 1e-29 45
AZC_1150 YP_001524066.1 periplasmic dipeptidase AF310956.2.orf6.gene Protein 1e-29 45
AZC_1150 YP_001524066.1 periplasmic dipeptidase NC_005054.2598281.p0 Protein 4e-31 44
AZC_1150 YP_001524066.1 periplasmic dipeptidase M97297.gene.p01 Protein 4e-31 44
AZC_1150 YP_001524066.1 periplasmic dipeptidase NC_014475.1.orf4.gen Protein 4e-31 44
AZC_1150 YP_001524066.1 periplasmic dipeptidase AE016830.1.gene2249. Protein 8e-30 44
AZC_1150 YP_001524066.1 periplasmic dipeptidase AF155139.2.orf6.gene Protein 1e-29 44
AZC_1150 YP_001524066.1 periplasmic dipeptidase FJ349556.1.orf5.gene Protein 3e-28 43
AZC_1150 YP_001524066.1 periplasmic dipeptidase AF130997.1.orf5.gene Protein 8e-26 42
AZC_1150 YP_001524066.1 periplasmic dipeptidase U82965.2.orf32.gene. Protein 3e-26 42