Gene Information

Name : AZC_1137 (AZC_1137)
Accession : YP_001524053.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Virulence
Product : response regulator receiver
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1264805 - 1265521 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGGACGCGAATCTCGAAACGGACTTCAGCCTTTCCATGCGACTGCTCCTCGTCGAGGACGACCAAGACGCGGCCGACTA
CCTGCGCAAGGCCTTCCGCGAGGCGGGCCATGTGGTGGACCATGCGGCCGACGGCGAGGACGGCCTCGCCTATGCGCTCG
ACGGCAAATATGACGTGCTGGTGGTGGACCGCATGCTGCCCCGCCGCGACGGCCTCTCGCTGGTCGCCGAACTGCGTGGG
CGCGGCGATGCCACGCCTGTGCTCATCCTCTCGGCGCTGGGACAGGTGGACGACCGCGTGGTCGGACTGCGGGCCGGCGG
CGACGATTATCTGCCCAAGCCCTATGCCTTCACCGAACTGCTTGCCCGCGTCGAGGCGCTGTCGCGCCGGGGGGCGCCGC
AGGCAGCCGAGACCGTCTATCGGGTGGGCGACCTTGAACTCGATCGCCTCGCCCATCGCGTCGCGCGCGGCGGCAAGGAG
ATCCCGCTCCAGCCGCGCGAATTCCGCCTGCTCGAATATCTCATGCGGCACGCGGGGCAGGTGGTGACGCGCACCATGCT
GCTGGAAAACGTCTGGGACTATCACTTCGACCCCCAGACCAACGTCATCGACGTCCACGTCTCCCGCCTGCGCTCCAAGA
TCGACAAGGGCTTCGACGTGCCGCTGATCCACACCGTGCGCGGCGCCGGCTACATGGTCCGCGTGGGCTTGCGCTAA

Protein sequence : 
MDANLETDFSLSMRLLLVEDDQDAADYLRKAFREAGHVVDHAADGEDGLAYALDGKYDVLVVDRMLPRRDGLSLVAELRG
RGDATPVLILSALGQVDDRVVGLRAGGDDYLPKPYAFTELLARVEALSRRGAPQAAETVYRVGDLELDRLAHRVARGGKE
IPLQPREFRLLEYLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHVSRLRSKIDKGFDVPLIHTVRGAGYMVRVGLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-41 45
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-40 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1137 YP_001524053.1 response regulator receiver BAC0111 Protein 4e-54 49
AZC_1137 YP_001524053.1 response regulator receiver BAC0125 Protein 4e-48 49
AZC_1137 YP_001524053.1 response regulator receiver BAC0083 Protein 3e-51 49
AZC_1137 YP_001524053.1 response regulator receiver BAC0308 Protein 1e-45 48
AZC_1137 YP_001524053.1 response regulator receiver BAC0638 Protein 6e-44 48
AZC_1137 YP_001524053.1 response regulator receiver BAC0347 Protein 1e-48 46
AZC_1137 YP_001524053.1 response regulator receiver BAC0197 Protein 7e-45 46
AZC_1137 YP_001524053.1 response regulator receiver NC_002516.2.879194.p Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AZC_1137 YP_001524053.1 response regulator receiver VFG1390 Protein 1e-41 45
AZC_1137 YP_001524053.1 response regulator receiver VFG0596 Protein 1e-41 45
AZC_1137 YP_001524053.1 response regulator receiver VFG1389 Protein 2e-35 43