Gene Information

Name : AZC_0102 (AZC_0102)
Accession : YP_001523018.1
Strain : Azorhizobium caulinodans ORS 571
Genome accession: NC_009937
Putative virulence/resistance : Unknown
Product : RNA binding S1 protein
Function : -
COG functional category : K : Transcription
COG ID : COG2183
EC number : -
Position : 120137 - 122482 bp
Length : 2346 bp
Strand : +
Note : resolvase, RNase H-like fold

DNA sequence :
ATGGCCGCACCCTCTGCCGACATCGCCCGCATCATCGCCGGCGAGATCGCCGCAAAGCCCGCGCAGGTGGTGGCGGCGGT
GGGGTTGCTGGATGAAGGCGCGACGGTTCCCTTCATCGCCCGCTACCGCAAGGAAGTGACCGGCGGCCTCGACGACACCC
AGCTGCGCACGCTGGAGGAGCGCCTCTCCTATCTGCGCGAGCTGGAGGCGCGGCGCGCCAGCGTGCTCCAGTCCATCGAG
ACGCAGGGCAAGCTCACCGACGAACTGGCCGCGAAGATCCGCGCCGCCGGCACCAAGGCGGAGCTGGAAGACCTCTACCT
CCCCTACAAGCCCAAGCGCCGCACCAAGGCGGAAATCGCCCGCGAGCGCGGGCTCGGAGCGCTAGCCGAAGCCATCCTCG
CCGACCGCACGAAGGAGCCGTCCGTCCTGGCGCAGGGCTTCCTGAAAGAGGAGGTGCCGGACGTGAAGACGGCCCTCGAC
GGCGCCCGCGACATTCTGGTGGAGATGTTCGCCGAGAATGCCGATCTCGTGGGCCGCCTGCGCGGACACCTTCAGGCCAA
TGCCCGCATCGTCTCCAAGGTGGTGGCGGGCAAGGAGGAGGCGGGCGCCAAGTTCCGCGATTATTTCGACCATTGGGAGA
AATGGGCGACCGTGCCCAGCCACCGCGCGCTGGCCATGCTGCGCGGGCGCAATGAGGAGTTCCTGACTCTCGACATCGAG
GTGGACTGGGACGACGCCTCTCCGGTGAAGCCGGTGGAGCGGATGATCGCCGCCTCCGTCAATGTCGGCCCCGTGGGCGG
CGGGCCGGGCGATGCGTTCCTGCGCGATGTGGCGCGCTGGGCGTGGCGGGTGAAGCTCTCGCTCCACCTCTCCATCGACC
TCATGACCGCCATGACCGAGAAGGCGGAAGAGGAGGCGATCCGCGTCTTCGCCCGCAATCTCAAGGATCTGCTGCTGGCC
GCCCCGGCCGGCTCGCGCACCACCATCGGGCTTGATCCCGGCATCCGCACCGGCGTGAAAGTGGCGGTGGTGGACGGCAC
GGGCAAGCTTCTCGGCACCTCGACCCTCTATCCCTTCCAGCCGCGCAACGACATTGCCGGCGCGAGCGCCGAGCTGGCGC
GCCTCATCGTCAAGCATCAGGTGGAGCTGATCGCCATCGGCAACGGCACCGCGAGCCGCGAGACGGAGAAGTTCGCCGCC
GATGTGATCGCCAAGCTTCCCGGCACCAAGCCGCGGACCGTGGTGGTGAGCGAGGCCGGCGCCTCGGTCTATTCCGCCTC
CGCGCTTGCAGCGGCCGAAATGCCGGACCTCGACGTGTCGCTGCGCGGCGCCGTCTCCATCGCACGCCGCCTTCAGGACC
CGCTGGCGGAACTGGTGAAGATCGAACCGAAATCCATCGGCGTCGGCCAGTACCAGCATGACGTGGACCAGAACCGCCTC
GCCAAAAGCCTCGACGCGGTGGTGGAAGACGCGGTGAATGCGGTGGGCGTCGATCTCAACACCGCCTCCGCGCCTTTGCT
CTCGCGCATCTCGGGCCTTGGTGCCTCGCTGGCGGAGGCTATCGTTGCCCATCGCAATCAGGTGGGGGCGTTCGCCAACC
GCAAGGAACTGCTGAAGGTCGCCCGCCTCGGCCCGCGCACCTTCGAACTGTGCGCCGGCTTCCTGCGCATCACCGGCGGC
ACCGAGCCGCTGGACGCCTCAAGCGTGCATCCGGAAGCCTATGGGCTCGCGAAGAAGATCATCTCCGCCTGCGGCCGTGA
CATCCGCAGCCTCATGGGCGACAGCGCGACGCTGAAGCGGCTCGATCCCGCCGTCTTCGTGGACGAGCGCTTCGGCCTGC
CCACCGTGCGCGACATTCTCTCCGAGCTGGAGAAGCCGGCCCGCGACCCGCGCCCGGAGTTCAGGACCGCCACCTTCATG
GAGGGCGTGAACACGATGTCCGACCTGAAGCCGGGCATGCTGCTGGAAGGCACGGTGACGAACGTCGCCGCCTTCGGCGC
CTTCGTGGACATCGGCGTCCATCAGGACGGGCTGGTGCACGTCTCGGCGCTGGCGGACCGGTTCGTGAAGGACCCGCACG
AGGTGGTGAAAGCCGGCGACATCGTGAAGGTGCGCGTGGTGGAGGTGGATGTGGCGAGGAAGCGCATCGCCTTGTCCATG
CGCAAGGATGGCGGCGAGGTGCGCGCCGCCCGTCCGCAGGGCGGGCCGCCGCAGGGCCGCCCGCTGCCCGGCGGCAAGTT
CACCGCCGGCCCGAAGCCGGGCAATGACGGCCGCCGCAATGCCCCGCCCGCCGACGGCGCGCTCGCCGCCGCGCTGGCGG
AAGCCATGAAGCGCAAGGGCAACTGA

Protein sequence :
MAAPSADIARIIAGEIAAKPAQVVAAVGLLDEGATVPFIARYRKEVTGGLDDTQLRTLEERLSYLRELEARRASVLQSIE
TQGKLTDELAAKIRAAGTKAELEDLYLPYKPKRRTKAEIARERGLGALAEAILADRTKEPSVLAQGFLKEEVPDVKTALD
GARDILVEMFAENADLVGRLRGHLQANARIVSKVVAGKEEAGAKFRDYFDHWEKWATVPSHRALAMLRGRNEEFLTLDIE
VDWDDASPVKPVERMIAASVNVGPVGGGPGDAFLRDVARWAWRVKLSLHLSIDLMTAMTEKAEEEAIRVFARNLKDLLLA
APAGSRTTIGLDPGIRTGVKVAVVDGTGKLLGTSTLYPFQPRNDIAGASAELARLIVKHQVELIAIGNGTASRETEKFAA
DVIAKLPGTKPRTVVVSEAGASVYSASALAAAEMPDLDVSLRGAVSIARRLQDPLAELVKIEPKSIGVGQYQHDVDQNRL
AKSLDAVVEDAVNAVGVDLNTASAPLLSRISGLGASLAEAIVAHRNQVGAFANRKELLKVARLGPRTFELCAGFLRITGG
TEPLDASSVHPEAYGLAKKIISACGRDIRSLMGDSATLKRLDPAVFVDERFGLPTVRDILSELEKPARDPRPEFRTATFM
EGVNTMSDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSALADRFVKDPHEVVKAGDIVKVRVVEVDVARKRIALSM
RKDGGEVRAARPQGGPPQGRPLPGGKFTAGPKPGNDGRRNAPPADGALAAALAEAMKRKGN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
NMB0075 NP_273139.1 transcriptional accessory protein Tex Not tested IHT-A Protein 0.0 63