Gene Information

Name : AM1_F0113 (AM1_F0113)
Accession : YP_001522417.1
Strain :
Genome accession: NC_009931
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 93877 - 94620 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence : 
ATGCCTGAATTCATGAATAATCAGAGCAATAAGCAGCATTCTATCTTGGTAGTTGATGATGAAGGGCCGATTCGACGAAT
TTTAGACACTAGGCTATCCATGATGGGCTATCACGTCTTCACTGCTGCTGACGGCGTAGAAGCACTAGAAATCTTTGATC
GTCAGCACCCTGATTTGATTGTTTTAGATGTTATGATGCCCAGACTGGATGGGTATGGTGTCTGTCGGGCCATCCGTAAG
ACCTCGAGGGTTCCAATCATTATGCTGACGGCACTTTCTGAGGTAGGAGATCGGATTACTGGCTTAGAAATGGGTGCGGA
TGATTACATGGTCAAGCCCTTTTCACCCAAGGAACTAGAATCTCGAGTGCGATGCATCATACGCCGAATGGGTTCTCTAA
AACCTTTTAATTATCGAGTGACCGGAGTGCTGAACATCGGTTCACTCCACATTGATACCAACAAGCGGAAGGTCTTCAGA
GGTCAAGAACGTATCATCCTAACCCACATGGAGTTTAGTCTGTTAGAACTATTGGCAAGTACCCCTGGAGCAGTAGTTTC
TCGTCAAGAGTTGTTAGAGAAAGTGTGGGGATATAGTAATGGGAGCATCGTTGACTCGCGAGTAGTTGATGTCCATGTGT
CTCGTCTTCGGAATAAGCTCAAAGCCAATCAGGTTGGAACCGAACTTATCCATACGATTCGAGGGGTAGGTTATACACTG
AAATGCGAACAATCTCCTAACTAG

Protein sequence : 
MPEFMNNQSNKQHSILVVDDEGPIRRILDTRLSMMGYHVFTAADGVEALEIFDRQHPDLIVLDVMMPRLDGYGVCRAIRK
TSRVPIIMLTALSEVGDRITGLEMGADDYMVKPFSPKELESRVRCIIRRMGSLKPFNYRVTGVLNIGSLHIDTNKRKVFR
GQERIILTHMEFSLLELLASTPGAVVSRQELLEKVWGYSNGSIVDSRVVDVHVSRLRNKLKANQVGTELIHTIRGVGYTL
KCEQSPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-27 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_012469.1.7685629. Protein 4e-36 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_002952.2859905.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_007793.3914279.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_007622.3794472.p0 Protein 4e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_002745.1124361.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_009782.5559369.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_002951.3237708.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_002758.1121668.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_003923.1003749.p0 Protein 4e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_009641.5332272.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator NC_013450.8614421.p0 Protein 5e-39 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator BAC0125 Protein 9e-34 43
AM1_F0113 YP_001522417.1 two-component transcriptional regulator HE999704.1.gene2815. Protein 1e-32 43
AM1_F0113 YP_001522417.1 two-component transcriptional regulator AE000516.2.gene3505. Protein 5e-32 42
AM1_F0113 YP_001522417.1 two-component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_F0113 YP_001522417.1 two-component transcriptional regulator VFG1390 Protein 1e-38 46
AM1_F0113 YP_001522417.1 two-component transcriptional regulator VFG1389 Protein 2e-30 45
AM1_F0113 YP_001522417.1 two-component transcriptional regulator VFG0596 Protein 3e-27 41