Gene Information

Name : AM1_E0077 (AM1_E0077)
Accession : YP_001522161.1
Strain :
Genome accession: NC_009930
Putative virulence/resistance : Unknown
Product : transposase, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 52647 - 54383 bp
Length : 1737 bp
Strand : +
Note : Downstream region overlaps with a putative transposase-associated ATP-binding protein.

DNA sequence :
GTGCCTAACAAAAGAATTGATTCCTATCATACTCGTGTTTATATGAACGGAAGAGACCTCGGCTTGAAACAAGCTGAAGC
AGCTTACATTGCCGAAATATCTACAAGAACCGGACAACGAATTGAGGCCGGCACCCATCAACCTAATCGCGGCCGCCTTC
AGGACCAACGCACCGTTCCCGACCCCTTAGCTGATGTGTGGGAAGACGAGCTAGAACCAATGCTGCGTCGAGACCCACGC
CTCAAACCCATGACCCTGTATGAGTACCTGCAGGATAAGTATCCAGGCCAGTATCCCCAAGTCCTGCGGACCCTACAACG
TCGGGTGAGAACGTGGAAAGCCTTACATGGACCAAGCCCTGAAGTGATGTTTGAATTGCGTCATGAACCCGGGGTACAAG
GGTTCTCCGATTTTACAGAACTCAAAGGCATCACGATTACCATTGCCGGCAAACCCTTTGAGCACCTGATATACCATTAC
CGTCTGGGATATAGCGGCTGGCGATATGCCCAGATCATCCAAGGAGGCGAAAGCTTTGTTGCCCTCTCAGAAGGATTGCA
AAATGCCTTTGCAGCCTGTGGAGGTGTTCCTACACAGCATCGTACTGATAGTTTGAGTGCAGCCTATCGCAACATGTGCG
GCCGCCGGTCCAAAAACCTCACGCGTTTGTACGACGAACTGTGTGACCACTATCGGCTAGAACCCACTCGTAACAACAAA
GGTGTAGCCCATGAGAATGGCTCCATTGAATCTCCCCATGGCCATCTCAAAAACCGAATTAAGCAGGCGATCTATCTGCG
CGGCAGTGCAGATTTTACGAGTGTTGGTGAGTATCAAGCTTTGATTGATGCCCAGGTTGCCAAGTTGAATCAACAGTGCC
AGGCCAAGTATGAGCAAGAAAAAGAGCATCTGCAACCCTTGCCCAAATATCGAACCCCTGACTATGAAGTGCTTACCGCT
AAAGTCAGTAAACGCAGCACCATTGATGTTCGTTGCATTCTATACACCGTTCCTTCTCGGCTAATTGGCCGTCAATTGGA
ACTGCATCTATACCACGACCGGATTGTCGGCTATCTAGAGCGACACCCAGTCGTGGAATTGCCGAGGAAGCGTGTCAGTG
GCAAAGGCAAACGTCGCGACCGTTGCATCAACTATCGCCATGTTATTGGTTCAATGCGATTGAAGCCTCGTGCTTTTATC
TATTGCACCTGGCAATCAGACCTACTTCCCAATCCTGAATACCGCCAAATCTGGGAACAGCTCAAAGCCCAATTTGACCT
GGAGCAGGCTGCCAAGATCATCGTGGAAGCCCTGTATATTGCTGCGGTTCAAGATAAAGAACAGGCCGTAGCAGTGTACT
TACAGCAGCAGCTTCGCTCATCCAGCCTTACCCTCAATCGCCTGAAAAAACAGTTTGAGCCGCCTCAGATGAAGCAGGTT
CCTGACCTCAGCATTGAACAACATTCACTTGAACTTTATGACAAACTCCTCCCCTCCTGCTCAGTCCCCGCTGAGCCCCT
ACCAGCACCTGAGCCTCTATTTAAAAAAGCTCAGGCTCTCCCACATGTTGACCCATTGGGAATCTATCGAATCCCAAGCC
ATGCAGGAAAACTGGTCCTATGCGGAATTCTTACTAGCCTTGTGCGAAACGGAGGCCCAAAGAAGAGAACAAGCTCGCCT
AAAACGTGCTCTCACCGAAGCCAGGCTCCCAAACGCAAAAAGTTTTACCAACTTTGA

Protein sequence :
MPNKRIDSYHTRVYMNGRDLGLKQAEAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPR
LKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHY
RLGYSGWRYAQIIQGGESFVALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMCGRRSKNLTRLYDELCDHYRLEPTRNNK
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVGEYQALIDAQVAKLNQQCQAKYEQEKEHLQPLPKYRTPDYEVLTA
KVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFI
YCTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
PDLSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVLCGILTSLVRNGGPKKRTSSP
KTCSHRSQAPKRKKFYQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 3e-95 46
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 1e-95 46
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 1e-95 46
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-96 46
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-96 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_E0077 YP_001522161.1 transposase, putative VFG1728 Protein 2e-96 46