Gene Information

Name : AM1_E0176 (AM1_E0176)
Accession : YP_001522259.1
Strain :
Genome accession: NC_009930
Putative virulence/resistance : Unknown
Product : transposase, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 124939 - 126669 bp
Length : 1731 bp
Strand : -
Note : Downstream region overlaps with a putative transposase-associated ATP-binding protein.

DNA sequence :
GTGCCAGCTCCTATTAAACCTCAACAGGTTCATCTTTATATGCAGACAAAACAATCCGGCTCTTCTCAAGAAACAGCAGC
TGCTAAAGCTGGCATTTCTACCCGCACAGCCCACCGCATTGATAGTGGTACTCATCGTCCCCAACGCGGCCGCCCTCATG
ACTGGAAAACCCGTGAAGATCCGCTGGATGGATTATGGGAATTAGAACTTGAGCCGATGTTAGAGCGTGAGCCTCGATTA
GAAGCGACTACTCTATTTGAGACCTTACAAGAGAACCATCCTGGGCAATATGATGACAAGATCAGAACCGTGCAACGCCG
AACCGCTAAATGGAAGGCAGCTCATGGCAAGCCCAAAGAAGTGATGTTCAAAATTCAACATCATCCTGGGGAGATGGGAC
AGTCAGACTTCGCTCAGCTCAAAGGTTTCAGTGTGACGGTTCAGGGTGAAGCCTTTCACCATATCTTGTATCACTATCGA
CTGAGCTATAGCGGCTGGCAGTACGTGCAGGTGATTCAAGGCGGAGAAAGTTTTATCGGCTTATCCCAAGGGCTACAAAA
TGCTCTAACCGCCTGTGGTGGCGTGCCCAAGATTCATCGTACCGATAGTCTGAGTGCGGCTTATCGCAATACTGGCGGCC
GCAATCCCCAGCTGACCCAGTTGTATTCGACTCTGTGTGACCATTACCGGATGCAGCCAACACGCAACAATCTGGGTGTC
TCTCATGAGAATGGCGGAATAGAGGGGTCTCATGGCTATTTCAAACGACGCCTGTGCCAAGCCCTGTATCGTCGAGGCAG
CTTTGACTTTGACTCGGTAGCTGAGTATCAGCAGTTCATCGAGCAAGTCATCGCCAAGCTGAATGCCAAGTGCCAAAAAA
AGTTTGCACTGGAGCTGCCCACCTTACAGCCCTTGCCCAGATACCGAACTCCTGATTATGAAGTGCGCAGTGCCAAAGTC
AGCTGCAATAGCACGATTGCCGTCCGCTGTGTCCTTTACACAGTCCCCTCTCGCTTAATTGGCCACCGCTTGAAATTACA
CCTATACCATGACCGCCTTGTCGGTTTCTTAGGCACCACTCCCGTAGTGGAATTGGCGCGGGTCCATGTCCATGGCTCTG
AGAAGAAAAGACGCGCTCGCAGCATCGATTACAAGCATGTGGCAGAAAGTCTCAGGAGAAAGCCAAACGCGTTTCTCTAC
TGCCAATGGCAATCAGAGCTACTGCCCAATCTTCAGTGGCATCAGCTGTGGGAATCACTCAAAGCTAATTTTGAGCAGGA
CCAGGCCGCACGATTAATCACCGAAGCCCTCTATATCGCTGCAACTCAAGATCAAGAATCTCAGGTGGCTGACTACCTAC
AAACTCAACTGGAACAGTCCACCCTGACCTTGAGCAGATTAAAACAAGCCTTTGAATTCAAGCTCTCGACTGAGCAATAT
CCTGACGTCACCTCACAACAGCACGATTTATCTGACTATGATCAACTCCTCCACAGCAGACCCGGACAACCCATACCAGT
TGCTGATGACAACCCTAAAACAGTTGCGGTTGAGGCATTTCCTCGACGAGTGGCAGAGCATCGAGCATCAAGCGACTCAG
GAGAATTGGTCCTACGCCCAGTTTCTGTTGGCTTTAGCTCAAGGCGAAGCCAGCCGTCGGGAGCAGAATCGGATTTCACG
CGCTCTAACCGAAGCGCAGCTGCCTTACGGAAAGTCCTGGACCAATTTTGA

Protein sequence :
MPAPIKPQQVHLYMQTKQSGSSQETAAAKAGISTRTAHRIDSGTHRPQRGRPHDWKTREDPLDGLWELELEPMLEREPRL
EATTLFETLQENHPGQYDDKIRTVQRRTAKWKAAHGKPKEVMFKIQHHPGEMGQSDFAQLKGFSVTVQGEAFHHILYHYR
LSYSGWQYVQVIQGGESFIGLSQGLQNALTACGGVPKIHRTDSLSAAYRNTGGRNPQLTQLYSTLCDHYRMQPTRNNLGV
SHENGGIEGSHGYFKRRLCQALYRRGSFDFDSVAEYQQFIEQVIAKLNAKCQKKFALELPTLQPLPRYRTPDYEVRSAKV
SCNSTIAVRCVLYTVPSRLIGHRLKLHLYHDRLVGFLGTTPVVELARVHVHGSEKKRRARSIDYKHVAESLRRKPNAFLY
CQWQSELLPNLQWHQLWESLKANFEQDQAARLITEALYIAATQDQESQVADYLQTQLEQSTLTLSRLKQAFEFKLSTEQY
PDVTSQQHDLSDYDQLLHSRPGQPIPVADDNPKTVAVEAFPRRVAEHRASSDSGELVLRPVSVGFSSRRSQPSGAESDFT
RSNRSAAALRKVLDQF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 5e-87 43
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 1e-87 43
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 1e-87 43
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 8e-89 43
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 8e-89 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_E0176 YP_001522259.1 transposase, putative VFG1728 Protein 3e-89 43