Gene Information

Name : AM1_D0149 (AM1_D0149)
Accession : YP_001521958.1
Strain :
Genome accession: NC_009929
Putative virulence/resistance : Virulence
Product : ABC transporter, ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 114306 - 115067 bp
Length : 762 bp
Strand : +
Note : -

DNA sequence : 
ATGTCTCAGCCTTCACAAATCTCTAACAACAAAGGCAGCTCCTTGATGTCTCTTGCCAGTACAAGTCTTTTTAAAGTGAG
GGGGGTGACTAAAACCTATGTCATGGGTGAGGTGACGGTTGAGGCCCTCAGATCGGTGGATTTAGAACTTTTTGCAGGTG
AATTCATCGTTTTACTAGGTCCTTCCGGTAGTGGGAAATCTACTCTACTCAATATTCTGGGGGGACTAGATGTGCCTTCC
AGTGGTCAGGTGATATTTCAGGGGCAAGACTTAACCGCCGCTAATGATCGCACCCTCACCCGCTTTCGTCGCCAAAGTGT
GGGCTTTGTTTTTCAGTTCTATAACCTTATTCCTAGTCTCACTGCTCGAGAGAATGTCGCTCTCGTTACCGAGATAGCCC
CCCAGCCCATGCATCCTCGCGAAGCATTAGAACTGGTTCATCTCGGTGATCGTGTCAATCACTTTCCAGCTCAACTATCC
GGGGGAGAACAGCAGCGGGTTGCGATCGCACGAGCGATTGCCAAACGCCCCCAAGTGCTGCTCTGTGATGAACCCACGGG
AGCTTTGGACTTTCAAACCGGTAAGCTCGTCCTGGAAGCCCTCGCCCAAGTCAATCGGGAGTTAGGGACAACGACAGCCG
TCATTACCCACAATGCTGGGATTGCCGCCATGGCCGATCGGGTGATTACCATGCGGAGTGGCGAGATAGTGGCTGTTCGA
GAGAATGAACACAAAGTGAAACCGGGAGAGTTGGAGTGGTAG

Protein sequence : 
MSQPSQISNNKGSSLMSLASTSLFKVRGVTKTYVMGEVTVEALRSVDLELFAGEFIVLLGPSGSGKSTLLNILGGLDVPS
SGQVIFQGQDLTAANDRTLTRFRRQSVGFVFQFYNLIPSLTARENVALVTEIAPQPMHPREALELVHLGDRVNHFPAQLS
GGEQQRVAIARAIAKRPQVLLCDEPTGALDFQTGKLVLEALAQVNRELGTTTAVITHNAGIAAMADRVITMRSGEIVAVR
ENEHKVKPGELEW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-36 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-37 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-27 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_D0149 YP_001521958.1 ABC transporter, ATP-binding protein NC_012469.1.7685735. Protein 2e-53 50
AM1_D0149 YP_001521958.1 ABC transporter, ATP-binding protein NC_008702.1.4606598. Protein 7e-33 45
AM1_D0149 YP_001521958.1 ABC transporter, ATP-binding protein CP001581.1.gene798.p Protein 1e-40 44
AM1_D0149 YP_001521958.1 ABC transporter, ATP-binding protein NC_012469.1.7686878. Protein 3e-39 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_D0149 YP_001521958.1 ABC transporter, ATP-binding protein VFG2059 Protein 5e-14 41