Gene Information

Name : AM1_D0011 (AM1_D0011)
Accession : YP_001521822.1
Strain :
Genome accession: NC_009929
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 7037 - 7780 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGCCTGAATTCATGAATAATCAGAGCAATAAGCAGCATTCTATCTTGGTAGTTGATGATGAAGGGCCGATTCGACGAAT
TTTAGACACTAGGCTATCCATGATGGGCTATCACGTCTTCACTGCTGCTGACGGCGTAGAAGCATTAGAAATCTTTGATC
GTCAGCACCCTGATTTGATTGTTTTAGATGTTATGATGCCCAGACTGGATGGGTATGGTGTCTGTCGGGCCATCCGCAAG
ACCTCGAGAGTTCCGATCATTATGCTGACGGCACTTTCTGAGGTAGGAGATCGGGTTACTGGCTTAGAAATGGGTGCAGA
TGATTACATGGTCAAGCCCTTTTCACCTAAGGAATTAGAATCACGAGTGCGATGCATCATACGCCGAATGGGTTCTCTAA
AGCCTTTTAATTATCGAGTTACCGGAGTGCTAAACATCGGTTCACTCCGGATTGACACCAACAAGCGGAAGGTCTTCAGA
GGTCAAGAACGTATCATCCTAACCCACATGGAATTTAGTCTGTTAGAACTATTGGCAAGTACCCCTGGAGCAGTAGTGTC
TCGTCAAGAGTTGTTAGAGAAAGTGTGGGGATATAGTAATGGGACCATCGTTGACTCGCGAGTAGTTGATGTCCATGTGT
CTCGCCTACGGAATAAGCTCAAAGCCAATCAGGTTGGAACCGAACTTATCCATACGATTCGAGGGGTAGGTTATACACTG
AAATGCGAACAATCTCCTAACTAG

Protein sequence :
MPEFMNNQSNKQHSILVVDDEGPIRRILDTRLSMMGYHVFTAADGVEALEIFDRQHPDLIVLDVMMPRLDGYGVCRAIRK
TSRVPIIMLTALSEVGDRVTGLEMGADDYMVKPFSPKELESRVRCIIRRMGSLKPFNYRVTGVLNIGSLRIDTNKRKVFR
GQERIILTHMEFSLLELLASTPGAVVSRQELLEKVWGYSNGTIVDSRVVDVHVSRLRNKLKANQVGTELIHTIRGVGYTL
KCEQSPN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-26 41
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 6e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_002952.2859905.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_002745.1124361.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_009782.5559369.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_002951.3237708.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_007622.3794472.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_002758.1121668.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_003923.1003749.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_009641.5332272.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_013450.8614421.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_007793.3914279.p0 Protein 2e-39 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator NC_012469.1.7685629. Protein 6e-36 46
AM1_D0011 YP_001521822.1 two-component transcriptional regulator BAC0125 Protein 1e-33 44
AM1_D0011 YP_001521822.1 two-component transcriptional regulator AE000516.2.gene3505. Protein 9e-32 43
AM1_D0011 YP_001521822.1 two-component transcriptional regulator HE999704.1.gene2815. Protein 8e-33 42
AM1_D0011 YP_001521822.1 two-component transcriptional regulator BAC0083 Protein 2e-30 41
AM1_D0011 YP_001521822.1 two-component transcriptional regulator FJ349556.1.orf0.gene Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_D0011 YP_001521822.1 two-component transcriptional regulator VFG1390 Protein 1e-38 47
AM1_D0011 YP_001521822.1 two-component transcriptional regulator VFG1389 Protein 4e-30 45
AM1_D0011 YP_001521822.1 two-component transcriptional regulator VFG0596 Protein 6e-27 41