Gene Information

Name : AM1_C0086 (AM1_C0086)
Accession : YP_001521533.1
Strain :
Genome accession: NC_009928
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 82752 - 83498 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTGCATTTATGAGTACTCTGAACAATCATCAGCAATCAATTTTGGTAGCTGATGACGAAGTACCTATTCGTCGGAT
TTTAGGTACACGCCTATCCAAAATAGGTTACCAAGTCTACACCGCTGCTGATGGAGTGGAAGCACTCGATGTCTTCTATG
ATCAATGTCCCGACCTGATTATCTTAGATGTAATGATGCCCAAGCTCGATGGTTATGGGGTCTGTCAAGCAGTTCGCAAG
ACATCGAGAGTTCCGATTATTATGCTGACTGCATTGTCGGAAGTCAAAGATCGCATTACTGGCCTGGAAATGGGTGCTGA
TGATTATATGGTCAAGCCCTTTTCACCGAAGGAATTAGAATCCCGTGTGCGATGTATCCTAAGACGATTGAGTCCTCTTA
AAGCTTTCAATCATCAAATGACGGGTGTGATTGAAATCGGTTCAGTACAAATTGACACCGACAAGCGGCAGGTTTTCCGA
GACCATGAGCGAGTCTTCCTGACTTATAAAGAGTTCAACCTCCTAGCATTATTGGCGAGTCGTCCTGGAGAAACCGTTTC
TCGTCAAGAGCTGTTACAGAAGGTATGGGAGTATAACAAAGATTCCATCGTTGATACGCGAACTGTCGATGTTCACATGT
CTCGTCTGCGTCAAAAACTCAAGGAGAAACTAGGAGAAACTATTCTGATTCATACGGTTCGTGGAGTGGGTTTTACATTG
AAACATGGTGAGAGCGGGCCACTATAG

Protein sequence : 
MPAFMSTLNNHQQSILVADDEVPIRRILGTRLSKIGYQVYTAADGVEALDVFYDQCPDLIILDVMMPKLDGYGVCQAVRK
TSRVPIIMLTALSEVKDRITGLEMGADDYMVKPFSPKELESRVRCILRRLSPLKAFNHQMTGVIEIGSVQIDTDKRQVFR
DHERVFLTYKEFNLLALLASRPGETVSRQELLQKVWEYNKDSIVDTRTVDVHMSRLRQKLKEKLGETILIHTVRGVGFTL
KHGESGPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 6e-30 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 2e-29 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_002952.2859905.p0 Protein 4e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_009641.5332272.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_013450.8614421.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_007793.3914279.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_003923.1003749.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_007622.3794472.p0 Protein 4e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_002745.1124361.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_009782.5559369.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_002951.3237708.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_002758.1121668.p0 Protein 7e-42 47
AM1_C0086 YP_001521533.1 two-component transcriptional regulator FJ349556.1.orf0.gene Protein 6e-37 45
AM1_C0086 YP_001521533.1 two-component transcriptional regulator BAC0083 Protein 4e-34 43
AM1_C0086 YP_001521533.1 two-component transcriptional regulator NC_012469.1.7685629. Protein 3e-39 43
AM1_C0086 YP_001521533.1 two-component transcriptional regulator BAC0638 Protein 3e-27 42
AM1_C0086 YP_001521533.1 two-component transcriptional regulator BAC0308 Protein 2e-30 42
AM1_C0086 YP_001521533.1 two-component transcriptional regulator HE999704.1.gene2815. Protein 4e-37 42
AM1_C0086 YP_001521533.1 two-component transcriptional regulator BAC0197 Protein 6e-31 41
AM1_C0086 YP_001521533.1 two-component transcriptional regulator BAC0125 Protein 1e-32 41
AM1_C0086 YP_001521533.1 two-component transcriptional regulator AF155139.2.orf0.gene Protein 2e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_C0086 YP_001521533.1 two-component transcriptional regulator VFG1389 Protein 1e-31 45
AM1_C0086 YP_001521533.1 two-component transcriptional regulator VFG0596 Protein 3e-30 43
AM1_C0086 YP_001521533.1 two-component transcriptional regulator VFG1390 Protein 1e-35 42