Gene Information

Name : AM1_A0260 (AM1_A0260)
Accession : YP_001520910.1
Strain :
Genome accession: NC_009926
Putative virulence/resistance : Unknown
Product : transposase, putative
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 264645 - 266381 bp
Length : 1737 bp
Strand : -
Note : Downstream region overlaps with a putative transposase-associated ATP-binding protein.

DNA sequence :
GTGCCTAACAAAAGAATTGATTCCTATCATACTCGTGTTTATATGAACGGAAGAGACCTCGGCTTGAAACAAGCTGAAGC
AGCTTACATTGCCGAAATATCTACAAGAACCGGACAACGAATTGAGGCCGGCACCCATCAACCTAATCGCGGCCGCCTTC
AGGACCAACGCACCGTTCCCGACCCCTTAGCTGATGTGTGGGAAGACGAGCTAGAACCAATGCTGCGTCGAGACCCACGC
CTCAAACCCATGACCCTGTATGAGTACCTGCAGGATAAGTATCCAGGCCAGTATCCCCAAGTCCTGCGGACCCTACAACG
TCGGGTGAGAACGTGGAAAGCCTTACATGGACCAAGCCCTGAAGTGATGTTTGAATTGCGTCATGAACCCGGGGTACAAG
GGTTTTCCGACTTTACAGAACTCAAGGGCATCACGATTACCATTGCCGGCAAACCCTTTGAGCACCTGATTTACCATTAC
CGTCTGGGATACAGCGGCTGGCGATATGCCCAGATCATCGAAGGAGGCGAAAGCTTTGTCGCCCTCTCAGAAGGATTGCA
AAATGCCTTTGCAGCCTGTGGAGGTGTTCCTACACAGCATCGTACTGATAGTTTGAGTGCAGCCTATCGCAACATGGGCG
GCCGCCGGTCCAAAAACCTCACTCGTCTGTACGACGAACTGTGTGACCACTATCGGCTAGAACCCACTCGTAACAACAAA
GGTGTAGCCCATGAGAATGGCTCCATTGAATCTCCCCATGGTCATCTGAAGAACCGAATTAAGCAGGCGATCTATCTGCG
CGGCAGTGCAGATTTTACGAGCGTTGCTGAGTATCAAGCCTTAATTGATGCACAGGTTGCCAAGTTGAATCAGCAGTGCC
AAACCAAGTATGAGCAAGAGAAAGACCATCTACAACCACTGCCCAAATATCGAACCCCTGACTATGAAGTGCTCACGGCT
AAAGTCAGCAAACGCAGCACCATCGATGTTCGCTGCATTCTATACACCGTCCCTTCTCGACTGATTGGTCGTCAATTGGA
ACTGCATCTATACCATGACCGGATTGTCGGCTATCTGGAGCGACACCCGGTGGTGGAATTGCCGAGGAAGCGCGTCAGTG
GCAAAGGCAAACGTCGCGACCGTTGCATCAACTATCGCCATGTTATTGGTTCAATGCGATTGAAGCCTCGTGCTTTTATC
TATTGCACCTGGCAATCAGACCTACTTCCCAATCCTGAATACCGCCAAATCTGGGAACAGCTCAAAGCCCAATTTGACCT
AGAGCAGGCTGCCAAGATCATCGTGGAAGCCCTGTATATTGCTGCGGTTCAAGATAAAGAACAGGCCGTAGCAGTGTACT
TACAGCAGCAGCTTCGCTCATCCAGCCTTACCCTCAATCGCCTGAAAAAACAGTTTGAGCCGCCTCAGATGAAGCAGGTT
CCTGACCTCAGCATTGAACAACATTCACTTGAACTTTATGACAAACTCCTCCCCTCCTGCTCAGTCCCCGCTGAGCCCCT
ACCAGCACCTGAGCCTCTATTTAAAAAAGCTCAGGCTCTCCCACATGTTGACCCATTGGGAATCTATCGAATCCCAAGCC
ATGCAGGAAAACTGGTCTTATGCGGAATTCTTACTAGCCTTGTGCGAAACGGAGGCCCAACGAAGAGAACAAGCTCGTCT
AAAACGTGCCCTCACCGAAGCCAGGCTCCCAAACGCAAAAAGTTTTACCAACTTTGA

Protein sequence :
MPNKRIDSYHTRVYMNGRDLGLKQAEAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPR
LKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGKPFEHLIYHY
RLGYSGWRYAQIIEGGESFVALSEGLQNAFAACGGVPTQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
GVAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQEKDHLQPLPKYRTPDYEVLTA
KVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFI
YCTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLRSSSLTLNRLKKQFEPPQMKQV
PDLSIEQHSLELYDKLLPSCSVPAEPLPAPEPLFKKAQALPHVDPLGIYRIPSHAGKLVLCGILTSLVRNGGPTKRTSSS
KTCPHRSQAPKRKKFYQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 7e-96 46
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 3e-96 46
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 3e-96 46
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 7e-97 46
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-97 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_A0260 YP_001520910.1 transposase, putative VFG1728 Protein 3e-97 46