Gene Information

Name : AM1_A0161 (AM1_A0161)
Accession : YP_001520818.1
Strain :
Genome accession: NC_009926
Putative virulence/resistance : Virulence
Product : iron(III) dicitrate ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1120
EC number : -
Position : 141942 - 142775 bp
Length : 834 bp
Strand : -
Note : -

DNA sequence : 
ATGATCACTGACACTACTGCATACGCCCTCACGACCCGGAAGCTCAAGCTAGCTTATGAAGGCAAAGTTATCATTGAGTC
CCTGGATTTAGCCATTCCTACGGGCAAAATCACGATTTTGGTAGGGCCGAACGGTTGTGGAAAGTCTACGTTGCTCAAGG
GATTAGGCCGATTACTCAAGCCCAAGCATGGCGTGGTGTATCTGGGGAGTGAATCGATTGCCAAACTGTCCAGCAAGGCT
ATTGCTAAACGATTAGGGTTGCTCCCTCAAGGACCCACTGCCCCAGAAGGATTGACCGTGAGAGATTTGGTAGCCCAAGG
TCGCTATCCTCATCAGGGTTGGCTGCAGCAATGGTCTAAAGACGATGAAAAGCAGGTGAACTGGGCCTTATCGATTACCC
AGATGCATGAGTTTTCCCATTACGCTTTAGATAATCTGTCCGGTGGACAGAGACAGCGAGCCTGGATTGCTATGACCCTA
GCGCAGGATACGGAAATATTGCTGCTAGATGAACCGACCACCTATCTTGATTTGGCTCATCAGATGGAAGTGCTCGATCT
GCTCTATGACTTGAATCAAGAACAAGGCCGCACCATTGTGATGGTGTTGCATGATTTGAACCAGGCTTGCCGTTATGGCG
ATCATCTAGTGGCGATCCGAGATGGCAGAGTTTACAAGCAGGGCCATCCCGAACGGGTGATGACGGAAACAATGGTACAG
GAAGTTTTTGGTCTGGAAAGTCAAATTGTGAGTGATCCGGTTGCAGGAACACCTTTATGTATTCCCATTGGTCGCAAAGT
CATACAAGCGAGAGATGTTACATGGAAATTATGA

Protein sequence : 
MITDTTAYALTTRKLKLAYEGKVIIESLDLAIPTGKITILVGPNGCGKSTLLKGLGRLLKPKHGVVYLGSESIAKLSSKA
IAKRLGLLPQGPTAPEGLTVRDLVAQGRYPHQGWLQQWSKDDEKQVNWALSITQMHEFSHYALDNLSGGQRQRAWIAMTL
AQDTEILLLDEPTTYLDLAHQMEVLDLLYDLNQEQGRTIVMVLHDLNQACRYGDHLVAIRDGRVYKQGHPERVMTETMVQ
EVFGLESQIVSDPVAGTPLCIPIGRKVIQARDVTWKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-55 50
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-51 49
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 2e-52 47
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 2e-52 47
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 47
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 47
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 47
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 2e-48 47
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-47 46
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 9e-52 46
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 9e-52 46
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 8e-52 44
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 8e-52 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_A0161 YP_001520818.1 iron(III) dicitrate ABC transporter BAC0164 Protein 9e-52 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_A0161 YP_001520818.1 iron(III) dicitrate ABC transporter VFG0925 Protein 5e-57 51
AM1_A0161 YP_001520818.1 iron(III) dicitrate ABC transporter VFG1042 Protein 8e-52 49