Gene Information

Name : AM1_6237 (AM1_6237)
Accession : YP_001520488.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 6306378 - 6308114 bp
Length : 1737 bp
Strand : +
Note : Downstream region overlaps with a putative transposase-associated ATP-binding protein.

DNA sequence :
GTGCCTAACAAAAGAATTGATTCCTATCATACTCGTGTTTATATGAACGGAAGAGACCTCGGCTTGAAACAAGCTGAAGC
AGCTTACATTGCCGAAATATCTACAAGAACCGGACAACGAATTGAGGCCGGCACCCATCAACCTAATCGCGGCCGCCTTC
AGGACCAACGCACCGTTCCCGACCCCTTAGCTGATGTGTGGGAAGACGAGCTAGAACCAATGCTGCGTCGAGACCCGCGT
CTCAAACCCATGACTCTGTATGAGTATCTGCAGGATAAGTATCCAGGCCAGTATCCCCAAGTCCTGCGGACCTTGCAACG
TCGGGTGAGAACGTGGAAAGCCTTGCATGGCCCGAGCCCCGAAGTGATGTTTGAATTGCGTCATGAACCCGGGGTACAAG
GGTTCTCCGATTTTACAGAACTCAAAGGCATCACGATTACCATTGCCGGTCAACCCTTTGAGCACCTGATATACCATTAC
CGTCTGGGATACAGCGGCTGGCGATATGCCCAGATCATCCAAGGAGGCGAAAGCTTTGTTGCCCTCTCAGAAGGATTGCA
AAATGCCTTTGCAGCCTGTGGAGGTGTCCCCCAACAGCATCGTACTGATAGTTTGAGTGCAGCCTATCGCAACATGGGCG
GCCGCCGGTCCAAAAACCTCACGCGTTTGTACGACGAACTGTGTGACCACTATCGGCTAGAACCCACTCGTAACAACAAA
GGTATTGCCCATGAGAACGGCTCCATCGAGTCTCCCCATGGCCATCTCAAAAACCGAATTAAGCAGGCGATCTATCTGCG
CGGCAGTGCAGATTTTACGAGCGTTGCTGAGTATCAAGCCTTAATTGATGCACAGGTCGCCAAGTTGAATCAGCAGTGCC
AAACCAAGTATGAGCAAGAGAAAGACCATCTACAACCCTTGCCCAAATATCGAACCCCTGACTATGAAGTGCTCACCGCT
AAAGTCAGCAAACGCAGCACCATCGATGTTCGCTGCATTCTATACACCGTCCCTTCTCGACTGATTGGTCGTCAATTGGA
ACTGCATCTCTACCACGACCGGATTGTCGGCTATCTGGAGCGACATCCAGTCGTGGAATTGCCGAGGAAGCGTGTCAGTG
GCAAAGGCAAACGTCGCGACCGTTGCATCAACTATCGCCATGTCATTGGTTCAATGCGATTGAAGCCTCGTGCTTTTATC
TATTGCACCTGGCAATCAGACCTACTTCCCAATCCTGAATACCGCCAAATCTGGGAACAGCTCAAAGCCCAATTTGACCT
GGAGCAGGCTGCCAAGATCATCGTGGAAGCCCTGTATATTGCTGCGGTTCAAGATAAAGAACAGGCCGTAGCAGTGTACT
TACAGCAGCAACTCCAGGCATCCAGTCTCACCCTCAATCGCCTGAAAAAACAGTTTGAGCCGCCTCAGATGAAGCAGGTT
CCTGACCTCAGCATTGAACAACATTCACTTGAACTTTATGACAAACTCCTCCCCTCCTGCTCAGTCCCCGCTGAGCCCCT
ACCAGCACCTGAGCCTCTATCTAAAAAAGCTCAGGCTCTCCCACATGTTGACCCATTGGGAATCTATCGAATCCCAAGCT
ATGCAGGAAAACTGGTCTTATGCGGAATTCTTACTAGCCTTGTGCGAAACGAAGGCCCAAAGAAGAGAACAAGCTCGGCT
AAAACGTGCTCTCACCGAAGCCAGGCTCCCAAACGCAAAAAGTTTTACCAACTTTGA

Protein sequence :
MPNKRIDSYHTRVYMNGRDLGLKQAEAAYIAEISTRTGQRIEAGTHQPNRGRLQDQRTVPDPLADVWEDELEPMLRRDPR
LKPMTLYEYLQDKYPGQYPQVLRTLQRRVRTWKALHGPSPEVMFELRHEPGVQGFSDFTELKGITITIAGQPFEHLIYHY
RLGYSGWRYAQIIQGGESFVALSEGLQNAFAACGGVPQQHRTDSLSAAYRNMGGRRSKNLTRLYDELCDHYRLEPTRNNK
GIAHENGSIESPHGHLKNRIKQAIYLRGSADFTSVAEYQALIDAQVAKLNQQCQTKYEQEKDHLQPLPKYRTPDYEVLTA
KVSKRSTIDVRCILYTVPSRLIGRQLELHLYHDRIVGYLERHPVVELPRKRVSGKGKRRDRCINYRHVIGSMRLKPRAFI
YCTWQSDLLPNPEYRQIWEQLKAQFDLEQAAKIIVEALYIAAVQDKEQAVAVYLQQQLQASSLTLNRLKKQFEPPQMKQV
PDLSIEQHSLELYDKLLPSCSVPAEPLPAPEPLSKKAQALPHVDPLGIYRIPSYAGKLVLCGILTSLVRNEGPKKRTSSA
KTCSHRSQAPKRKKFYQL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67341.1 R6-like protein Not tested PAI II CFT073 Protein 3e-95 46
r6 AAC61728.1 transposase R6 Not tested PAI I CFT073 Protein 9e-96 46
unnamed AAL67386.1 R6-like protein Not tested PAI II CFT073 Protein 9e-96 46
c3607 NP_755482.1 hypothetical protein Not tested PAI I CFT073 Protein 2e-96 46
c5144 NP_756992.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-96 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_6237 YP_001520488.1 transposase VFG1728 Protein 1e-96 46