Gene Information

Name : mutS (AM1_5596)
Accession : YP_001519865.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : DNA mismatch repair protein MutS
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0249
EC number : -
Position : 5653963 - 5656614 bp
Length : 2652 bp
Strand : +
Note : This protein performs the mismatch recognition step during the DNA repair process

DNA sequence :
ATGAGCGATTCTGTTGCCCCTGATGTCCCTGTTATAAGAGAAGGCAAAAACCCAGCCCAACATCGAGATCGCACTACCGT
AGATCGGGAAGCTCTCTCCCCGATGATGCGCCACTATGTGGACCTCAAAGATGAATACCCCCAGACTATTTTGTTGTATC
GGATGGGGGACTTTTATGAGACCTTCTTTGAAGATGCTTGTACTATTGCCCAAGCATTAGAACTGGTCTTGACCAGTAGG
CAGTCTGGGAATGAGGTGGGTCGGGTGGCAATGGCGGGGATTCCCCACCACCAGCTCGATCGCTACAGTCGCTTGTTGGT
GGAAAAAGGCTTTGCCGTTGCTATCTGTGATCAGATGGAGGACCCAGCCCAAGCTCAGGGGTTAGTGAAGCGGGAGGTCA
CTCGGGTGATAACCCCTGGCACCTTGTTGGAAGAGGGGATGCTGAATGCCCGCAGTAATAATTTTCTAGCGGCGTTTGTG
TTGGCAGGTAATCACTGGGGGTTGGCCTATGCGGATATCTCCACCGGGGAGTTCTTGACGACTCAGTTTAGTGAACGGGA
AACTTTGGCTCAAGAATTGCTGCGGCTTCAGCCTTCGGAAGTATTGTTCCCAACGGATGCGCCCGATATTCAGCAGATTT
TGCGACCTGGCGAACAGTCGGATCTACTCCCGGAAGGATTGCCGAATCAGTTTTGCTACTCATTGCGATCGCAAACGTCA
TTCACGCAAGCAGAAGCCCGTCAGCGCATCCAAGAAGTCTATGGGGTGCGCTCTTTGGAAGGGCTTGGATGCGAACATCT
CCCCTTGGCCGTGCGAGCGGCGGGTGGGCTATTAGCTTATCTAGAAGCCACCCAAAAAGATACCCACATTCCCCTTCAAC
CCCTGGCCACTTATACCCTCAGCCAATATCTGGTGCTTGACCACCAAAGTCGGCGTAATTTAGAACTCACCCAAACCTCC
CGCGATGGAACCTTTCGGGGGTCTTTGCTCTGGGCAATCGATCGCACCCGTACTGCTATGGGTAGTCGAGCCTTGCGACG
ATGGTTGCTGCAGCCCTTACTCGATCTCAATGATATTCAGGCCCGCCAAGCTGCCATTACCGAGTTATTGCCTCAAACTG
GTTTTCGCAAAGAACTCCAAAACCAGCTGCAGAAAATTTATGATTTAGAACGTCTGGCAGGGCGGGCGGGCTCCGGCACT
GCCAATGCCCGCGACCTCGTTGCTTTGGCAGAATCTTTGGGGCAATTAACAGAGCTATCTCACAAAGTCGCTAAGTGTGA
GGCTCAGTATTTGCAGGCTCTACAAACGGTTCCTCCCATCCTCGATCAGCTGGCCCAGCGTCTGCGTGCCCATTTAGTGG
AGTCTCCTCCCATCTCTTTAACGGAAGGGGGCCTTATTAAGCCGAGCGTTAATCCTGAGCTGGATCAGATGCGTCAGCAA
ATTGTTAGCGACCAGCAGTGGATTGCCAATTTGGAGAAGGACGAACGAGAACGCACGGGAATTTCCACCTTAAAAGTGGG
GTTCAACAAAGCCTTCGGTTACTTTATTAGTATTTCTCGTGCCAAAGCCGATCAAGCACCTGATGACTATATCCGTAAGC
AAACCCTGACGAACGAAGAGCGATTTATTACCCCGGAGCTAAAGGAACGAGAGGCTCGGATCTTCACTGCCCAAACGGAA
CAATTTCAACTGGAATATGACCTATTTGTTACTCTGCGCACAGAAGTCGGGGAGCAGGCCAGTTTGATTCGGACGGTGGC
TGCCGCCGTTTCTGCCGTTGATATTCTGGTGGGGCTGACGGAAGTTGCGGTGTATCAGGGGTACTGCTGTCCAACTATGA
GCGACAGTCGCGAGATTCAAATCCTTGACGGTCGTCACCCGGTGGTTGAGCAGTCTCTGCCACCCGGTTTTTTTGTCCCT
AATGCGACCGAATTAGGGAGTGCTCCTTCCGCTGAATTAACCCCCCATCCCGATCTAGTCATCTTGACGGGGCCGAATGC
AAGTGGAAAAAGTTGTTATTTGCGCCAAGTGGGTCTGATTCAGCTTATGGCTCAAATTGGTAGCTATGTGCCAGCACAAT
CGGCGCGGTTAGGGATTTGCGATCGCATCTTCACTCGCGTAGGAGCCGTGGATGATTTGGCCACTGGACAGTCCACATTT
ATGGTGGAAATGAATGAAACCGCAAATATCCTCAACCATGCTTCTTCTAAATCATTGGTCCTATTGGATGAGATTGGTCG
AGGCACCGCTACCTTTGATGGATTGGCCATTGCTTGGTCCGTGGCGGAGCACCTTGCTGCCGTTATCCAAGCCCGCACGA
TTTTTGCCACCCACTACCATGAGCTGAATGAGCTGGCGAGTTTGGTGGAAAATGTGGCTAACTATCAGGTGTTGGTTAAA
GAACTTCCAGATCAAATTATCTTTCTGCACCAAGTGTGCCCGGGTGGGGCTAGTCGTTCCTATGGGATTGAAGCGGGACG
GTTGGCCGGTTTACCCCCATCGGTGATTAAGCGAGCGAAGCAAGTGATGAAGCAGATCGAGCAGCATAGCAAAATCGCTG
TGGGGCTTCGCAAAGGTAATACTCAACCGCGTGCCCGTAAATCATCTGCTGAAACTGAGGCTAAAACCCAGCAGTTTGAA
TTACCTTTTTGA

Protein sequence :
MSDSVAPDVPVIREGKNPAQHRDRTTVDREALSPMMRHYVDLKDEYPQTILLYRMGDFYETFFEDACTIAQALELVLTSR
QSGNEVGRVAMAGIPHHQLDRYSRLLVEKGFAVAICDQMEDPAQAQGLVKREVTRVITPGTLLEEGMLNARSNNFLAAFV
LAGNHWGLAYADISTGEFLTTQFSERETLAQELLRLQPSEVLFPTDAPDIQQILRPGEQSDLLPEGLPNQFCYSLRSQTS
FTQAEARQRIQEVYGVRSLEGLGCEHLPLAVRAAGGLLAYLEATQKDTHIPLQPLATYTLSQYLVLDHQSRRNLELTQTS
RDGTFRGSLLWAIDRTRTAMGSRALRRWLLQPLLDLNDIQARQAAITELLPQTGFRKELQNQLQKIYDLERLAGRAGSGT
ANARDLVALAESLGQLTELSHKVAKCEAQYLQALQTVPPILDQLAQRLRAHLVESPPISLTEGGLIKPSVNPELDQMRQQ
IVSDQQWIANLEKDERERTGISTLKVGFNKAFGYFISISRAKADQAPDDYIRKQTLTNEERFITPELKEREARIFTAQTE
QFQLEYDLFVTLRTEVGEQASLIRTVAAAVSAVDILVGLTEVAVYQGYCCPTMSDSREIQILDGRHPVVEQSLPPGFFVP
NATELGSAPSAELTPHPDLVILTGPNASGKSCYLRQVGLIQLMAQIGSYVPAQSARLGICDRIFTRVGAVDDLATGQSTF
MVEMNETANILNHASSKSLVLLDEIGRGTATFDGLAIAWSVAEHLAAVIQARTIFATHYHELNELASLVENVANYQVLVK
ELPDQIIFLHQVCPGGASRSYGIEAGRLAGLPPSVIKRAKQVMKQIEQHSKIAVGLRKGNTQPRARKSSAETEAKTQQFE
LPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 2e-123 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
mutS YP_001519865.1 DNA mismatch repair protein MutS VFG0562 Protein 6e-135 41