Gene Information

Name : AM1_5540 (AM1_5540)
Accession : YP_001519813.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5588625 - 5589302 bp
Length : 678 bp
Strand : -
Note : -

DNA sequence : 
ATGAAGCTTCTACTAGTAGAAGATGACGAGCGAATTGCAGAAGCATTGGCAGAAGATCTGACGGATCAGCATTATGCAGT
AGATATTGCCCATGACGGGGAAATGGGCTGGGAACTACTAGAGGCGTTTACCTATGACTTGGTTTTGCTCGATGTGATGT
TGCCTAAAATGGATGGTTTGGCCTTTTGTCGACAGATGAGAGCACAAGGTTTGGATATTCCTGTATTGATGCTGACGGCT
CGAGATACCACGGCCAATAAAGTCGATGGTCTAGACGCAGGTGCCGATGATTATGTCGTCAAACCTTGTGAGTTAGAGGA
AATATCTGCTAGGATTCGAGCCCTTTTGCGTCGGGGTCCCATGACCTCGCCACCTATCCTGGAATGGGAGGATCTAAAGT
TAAATCCCAATACCTGTGAGGTCTTTTTTCAAGAAGAGATAATTGCTTTGACACCCAAAGAATATAGTCTATTGGAGCTT
TTTTTAAGAAACAAGCGTCGAGTATTCAGTCGAGCCCAAATCCTGGAACATCTTTGGGCTTATGAAGTTTTACCTGAAGA
AGATACGGTGAAAGCCCATATCAAAGGGTTACGGCATAAATTGAAAGGGGCAGGAGCCCCCAATGATTTAATTCAAACGG
TCTATGGTTTTGGCTATCGTCTTAAACAGGTTTCGTAA

Protein sequence : 
MKLLLVEDDERIAEALAEDLTDQHYAVDIAHDGEMGWELLEAFTYDLVLLDVMLPKMDGLAFCRQMRAQGLDIPVLMLTA
RDTTANKVDGLDAGADDYVVKPCELEEISARIRALLRRGPMTSPPILEWEDLKLNPNTCEVFFQEEIIALTPKEYSLLEL
FLRNKRRVFSRAQILEHLWAYEVLPEEDTVKAHIKGLRHKLKGAGAPNDLIQTVYGFGYRLKQVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_007793.3914065.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_002758.1121390.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_010079.5776364.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_002952.2859858.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_007622.3794948.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_003923.1003417.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_013450.8614146.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator NC_002951.3238224.p0 Protein 9e-36 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator BAC0347 Protein 7e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_5540 YP_001519813.1 two-component transcriptional regulator VFG1390 Protein 2e-40 42
AM1_5540 YP_001519813.1 two-component transcriptional regulator VFG1702 Protein 1e-31 41