Gene Information

Name : AM1_5262 (AM1_5262)
Accession : YP_001519543.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : two-component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 5332030 - 5332737 bp
Length : 708 bp
Strand : -
Note : -

DNA sequence : 
ATGGGTCAGATTCTGTTAGTGGAAGATGAAGAAAATATTCGGGAAACTATTGCTCCCGCACTACAAAGTGAGGGATATCG
GGTAATCACGGCTGCGGATGGCCAAACAGCCCTGGATGTCATTCAGCTTTTTAAGTCGCGATCGCAGCAGGCATCCACCC
TAGACCTGATTATTTTAGATATTATGCTGCCTGGCATTAATGGCATTGATCTGTGCCGGTTTATTCGTCGGGAAGGCTCG
ACGGTTCCGGTACTGATGTTGAGTGCCAAGGATACGGAAGCCGATCGGGTTGTCGGTCTGGAAGTGGGTGCTGACGACTA
TCTCACGAAGCCCTTTGGCATGCGGGAACTGATCGCTCGCTGTCGGGCTCTCTTAAGACGACAGCGGCTGAATAATACTG
ACCCTCAAGGCACCCTGCTCACCTGTCGTGAGATCAGTTTGCATCCTGATGAATGTCGGGTCATGGTGCGAGATGAAGAA
GTCAATCTATCGCCCAAAGAATTCAGGATTTTAGAATTATTTATGAGCTATCCCCGGCGAGTGTGGCCAAGGGAGCAGAT
TCTCGAAAAGATTTGGGGGCCAGACTATATCGGCGATAGCAAAACGGTCGATGTACATATTCGTTGGCTACGGGAAAAAA
TAGAACTTGACCCCAGTAATCCTGATTACTTAGTCACCATTAGAGGATTTGGCTATCGGTTTGGATAA

Protein sequence : 
MGQILLVEDEENIRETIAPALQSEGYRVITAADGQTALDVIQLFKSRSQQASTLDLIILDIMLPGINGIDLCRFIRREGS
TVPVLMLSAKDTEADRVVGLEVGADDYLTKPFGMRELIARCRALLRRQRLNNTDPQGTLLTCREISLHPDECRVMVRDEE
VNLSPKEFRILELFMSYPRRVWPREQILEKIWGPDYIGDSKTVDVHIRWLREKIELDPSNPDYLVTIRGFGYRFG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 4e-32 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_5262 YP_001519543.1 two-component transcriptional regulator AE016830.1.gene1681. Protein 2e-42 44
AM1_5262 YP_001519543.1 two-component transcriptional regulator NC_012469.1.7685629. Protein 2e-35 44
AM1_5262 YP_001519543.1 two-component transcriptional regulator AF155139.2.orf0.gene Protein 1e-32 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_5262 YP_001519543.1 two-component transcriptional regulator VFG1563 Protein 2e-32 41
AM1_5262 YP_001519543.1 two-component transcriptional regulator VFG1702 Protein 8e-33 41