Gene Information

Name : AM1_4952 (AM1_4952)
Accession : YP_001519241.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : manganese ABC transporter ATP-binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1121
EC number : -
Position : 4989929 - 4990672 bp
Length : 744 bp
Strand : -
Note : -

DNA sequence :
ATGAACAGTGCTAGCAGTCTGGCTGTGGACCATTTAGGTGTGCAATACCGTATGGTAAAAGCCCTCACCAACGTGACTTG
TTCCGTCAACTCAGGACGGTTAACCGGTATTATTGGCCCGAATGGAGCTGGGAAAAGTACGCTGCTGAAAGCAATGCTGG
GTTTGGTTTTGCCCACGAGTGGACAGGTGATGTGGGGGGATAAGCCCCTCAAGCAGCAGCTCGATCGAGTCGCCTATATC
CCGCAGCGATCGCAAATTGATTGGACCTACCCCGCCACGGTTTGGGATGTCGTCCTTATGGGACGGATTCGCAAAACTGG
CTGGTTAAAGCGATACTCCACCGTGTCTCGACGTTTGGCTGCAGATGCATTAGAGCGAGTGGGGATTGCAAACTTAAAGC
ATCGCCCCATTGGTCAACTCTCTGGAGGACAGCAACAGCGCGTCTTTCTAGCGAAAGCGTTAACGGAAGAAGCCGAAATT
TTTTGTCTAGACGAACCCCTAGCTGGCATTGATAAAAAAACCGAAGCCATTGTGTTCAATATTTTGCATGAATTAGCCCA
TACGGGACATACCGTGCTGGTGGTTCACCATGATTTAGGGCAAGCCATTACCAACTTTGATGATTTAATTTTGCTTAACC
GTGAACTGATTGCTAGCGGTTCTCGCGAAGATGTATTGACCAAGAACAATATTCAACGCGCGTTTGGCGGGCATGTGCCT
TTCTTTGAATCCAACGCCGCCTAA

Protein sequence :
MNSASSLAVDHLGVQYRMVKALTNVTCSVNSGRLTGIIGPNGAGKSTLLKAMLGLVLPTSGQVMWGDKPLKQQLDRVAYI
PQRSQIDWTYPATVWDVVLMGRIRKTGWLKRYSTVSRRLAADALERVGIANLKHRPIGQLSGGQQQRVFLAKALTEEAEI
FCLDEPLAGIDKKTEAIVFNILHELAHTGHTVLVVHHDLGQAITNFDDLILLNRELIASGSREDVLTKNNIQRAFGGHVP
FFESNAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 7e-42 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 5e-42 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-41 41
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-41 41
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-41 41
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-40 41
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-40 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4952 YP_001519241.1 manganese ABC transporter ATP-binding protein BAC0400 Protein 1e-45 45
AM1_4952 YP_001519241.1 manganese ABC transporter ATP-binding protein BAC0350 Protein 2e-41 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4952 YP_001519241.1 manganese ABC transporter ATP-binding protein VFG0526 Protein 2e-41 41