Gene Information

Name : AM1_4951 (AM1_4951)
Accession : YP_001519240.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : chelated iron ABC transporter permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 4989059 - 4989907 bp
Length : 849 bp
Strand : -
Note : -

DNA sequence : 
ATGTATGACCTCTTAATTGAGCCGCTGCAAGCAGAATTTATGCAGCGTTCTTTACTCACAGCGGTTCTAGTGGGAATCGT
TTGTGCCACCGTCGGCTGTTACCTGATGGTTCAGCGTTTAGCCCTATTAGGGGATGCCATTAGTCACTCTGTATTGCCTG
GCCTTGTTATTGCCTACATCATTGGCATAGATATTTTCCTAGGGGCATTTATTGCGGGGGTATTTAGTACCATTGTGATT
GCCTGGATTCATACCCAATCACAAATTAAAGAAGATGCCGCCATGGGAATTGTGTTCTCAGCCTTCTTTGCCCTAGGCAT
CACTCTGATGACCGTTGTTCAGAAAGAAAACAAAATTGACCTCAATCACTTCTTATTTGGCAATATCCTCAGCGTTACCC
AATCAGAAGTGATCAATACCTTGGTGATTACGCTGATTGTCCTAGTGGTGATTGTGTTGCTCTTCAAAGAACTGATGCTT
TACACCTTCGACCCCGTTGGTGCTCAAGCCGCAGGATTACCCACCAATCTACTCAATTTCGGGTTGATGGTGTTGATTGC
CCTCACCATTGTGGCAAGCCTCAAGTCCGTGGGAGTAATTTTGGTGTTAGCGATGTTGATTACCCCAGGGGCAACAGCTT
ACCTCCTGGTCTATCGGCTGCATATGATGATGATTGTTGGGGCTGCCTTCGGAGTGATTTCCAGTATCACTGGCATGTAT
CTGAGCTTTCACTTCAATTTACCCTCAGGACCTGCCATCGTTTTAGTGGCATTCAGCTTCTTTTTATTGGCGTTTCTATT
TAGCCCCACTCAAGGATTACTCACCCAATCCCTAGCAAAAACGGAATGA

Protein sequence : 
MYDLLIEPLQAEFMQRSLLTAVLVGIVCATVGCYLMVQRLALLGDAISHSVLPGLVIAYIIGIDIFLGAFIAGVFSTIVI
AWIHTQSQIKEDAAMGIVFSAFFALGITLMTVVQKENKIDLNHFLFGNILSVTQSEVINTLVITLIVLVVIVLLFKELML
YTFDPVGAQAAGLPTNLLNFGLMVLIALTIVASLKSVGVILVLAMLITPGATAYLLVYRLHMMMIVGAAFGVISSITGMY
LSFHFNLPSGPAIVLVAFSFFLLAFLFSPTQGLLTQSLAKTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 1e-44 46
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-44 46
sitD NP_461785.1 permease Virulence SPI-1 Protein 3e-45 45
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 2e-45 45
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 4e-45 45
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 4e-45 45
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-45 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4951 YP_001519240.1 chelated iron ABC transporter permease BAC0352 Protein 1e-45 45
AM1_4951 YP_001519240.1 chelated iron ABC transporter permease BAC0442 Protein 5e-48 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4951 YP_001519240.1 chelated iron ABC transporter permease VFG0528 Protein 1e-45 45