Gene Information

Name : AM1_4786 (AM1_4786)
Accession : YP_001519075.1
Strain : Acaryochloris marina MBIC11017
Genome accession: NC_009925
Putative virulence/resistance : Virulence
Product : type I restriction-modification system, M subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0286
EC number : -
Position : 4820804 - 4823227 bp
Length : 2424 bp
Strand : -
Note : -

DNA sequence :
ATGGATGCAGCATCACAAAACAAGCTGATTTCATTCATTTGGTCGATTGCAGATGACTGCTTGCGTGATGTCTACGTTCG
CGGAAAATACCGCGATGTCATCTTGCCGATGTTTGTGCTGCGGCGGTTAGATTGTCTGCTGGAGGAGACCAAGGATGCAG
TCATGGAAGAGGTTCGGTTTCAGCGGGAATCCGTGGGGCTGACCGAGCTAGAGTCTGGTGCGTTAAAGGATGCCTCGGGC
TATGTGTTCTACAACACTTCAGATTGGACGCTGAAAAGATTAGTTGAAACGGCGTCCAATAACCGCCAAATTTTAGAGGC
CAACTTTAAAGCCTATCTGGATGGATTTAGCGAGAACGTCAAAGAGATCATTGACAGTTTTTATCTGCGGGACCAAATCA
AACGGATGGTGCAGGCGGATGTACTGTTAGATGTCTTGGAAAAGTTTACGAGTCCCTATATCAATTTCAGCCCAACTCAA
GGTGAAGATCCGGATGGACGCAAGCTGGCGGGTTTGAGCAATCTGGGGATGGGCTATGTGTTTGAGGAGCTGATCCGTAA
GTTTAACGAAGAAAATAACGAGGAGGCTGGAGAGCACTTCACCCCCCGCGAGGTGATCAAGCTGATGACACACTTGCTGT
TTATGCCAGTGAAGGAGCAGCTTCCGCCCGTGATGTTGATCTATGACGGGGCCTGCGGTTCAGGGGGGATGTTGACAGAG
TCCCAAAACTTTATCAGCGACCCGGAGGGGGGAATCAAATCAGATGCTCAGGTCTACCTCTATGGCAAGGAGGTCAACCC
GGAGACCTATGGCATTTGCAAGTCGGACATGATGATTAAGGGGAATAGTCCTGAGAACATCAAACTGGGATCGACGCTGG
CGATGGATGAGTTTGCCGGAATGCGGTTTGATTTCATGCTGGAAAATCCACCCTATGGCAAGTCCTACGCAGCGGATCAA
AAACATATCCTAGATGGCAAGGATGTCCTGGATGAGCGGTTTTTGTTACCACTGAAGGATTTTTGGGATGAGGAAAGTTT
AGAGAAGGCAACGCCCCGCTCTTCGGATGGGCAGTTGCTGTTTCTAATGGATATGGTTAGCAAAATGAAGCCTCTGGACC
AGAGTCCGGCAGGTTCCAGAATTGCGTCAGTTCACAATGGGTCTTCGCTGTTTACAGGGGATGCGGGTAGCGGGGAGAGC
AATATTCGCCGCTACATCATTGAAAATGACTGGCTGGAGGCGATCGTCCAGTTGCCTCAGAATATGTTTTACAACACCGG
CATTTCCACCTATGTGTGGGTGCTGTCGAATAATAAGGCACCGGAACGGCAGGGAAAGGTGCAGCTGATTGATAGGTCGG
AGCTGTATCGCAAGCTGCGGAAGAATCTGGGGGCGAAGAACTGTGAGTTTGCACCGGAGCAGATTGAGAAGATTACTCAC
CTGTATTTAGATCGGGTGCATCAGCCGACGTTGCCGCCTAGTGAAGATAGGGAGCTGCCACCGCCGCCCATCTCTAAGGT
GTTTGATAATCAGGATTTTGGCTTTTACAAGGTAACTGTGGAACGGCCCCTGCGGCTGTTAGCTCAGTTTACGCCGGAGC
GGGTGGCGACGCTGCGCTATGTGCCTGTCCTGGCGGAGGTAATGGAGTGGGCCTATGGTGAGTGGGGTGATGAGATTTAC
ACGAGCCTAACGGACCATAAGCAAAAAATTGAGGAATACCTGGAAAAGGAAGAAATTAGCCTGACGGCGAAGAATCGCAA
GGCGTTGTTTACAGCGAAGACCTGGGAAAATCAGCGGGATTTGATGCAGGTAGCGGAGCAGCTCATGGCCTCGGTGGAGC
AGGAGGTTTGGCATGATTTTAATGATTTTGCTGAGCGGGTGAATGATACGCTCAAAACTTTGGCCAGACAGTTGGACAGC
AAGCTGTCGGCTAGTGAGAAGAGGCAAATTTTTAATGCGGTGAGTTGGCGGGATGAGGCGGCGGCCAGGGTGATTAAAAA
GGTGCATAAGCTGAAGGGTGAGAAGCTAGCGGAGTTATTGGAGCATTTGGGCACCACGGAGGAGCACCTGGCGGACTTTG
GGTACTGGCCTGGGGAAACGGCGGGGCAGTGGATTGAGTATGAGACGGATAGTGAGCTGCGGGATACGGAAAGTGTGCCG
TTGAACTATGGGCAGGCACTGGAGCGGGGTACGGCGCAGATCCATGGGTATTTTTTGGCGGAGGTGCGGCCCCATGTTGA
GGATGCTTGGATCGCGTTGGATAGTACGAAGATTGGCTATGAGATTAATTTCAATAAGTATTTTTATCAGCACAAACCGT
TGAGGAAGCTGGAGACGGTCGTTGAGGAAATTTTAGAGCTGGAGAAGAAGACGGAAGGCTTATTGAAGCGGTTAGTCAGT
TTTGGGGCGACTACCGATGGCTAA

Protein sequence :
MDAASQNKLISFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDCLLEETKDAVMEEVRFQRESVGLTELESGALKDASG
YVFYNTSDWTLKRLVETASNNRQILEANFKAYLDGFSENVKEIIDSFYLRDQIKRMVQADVLLDVLEKFTSPYINFSPTQ
GEDPDGRKLAGLSNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIKLMTHLLFMPVKEQLPPVMLIYDGACGSGGMLTE
SQNFISDPEGGIKSDAQVYLYGKEVNPETYGICKSDMMIKGNSPENIKLGSTLAMDEFAGMRFDFMLENPPYGKSYAADQ
KHILDGKDVLDERFLLPLKDFWDEESLEKATPRSSDGQLLFLMDMVSKMKPLDQSPAGSRIASVHNGSSLFTGDAGSGES
NIRRYIIENDWLEAIVQLPQNMFYNTGISTYVWVLSNNKAPERQGKVQLIDRSELYRKLRKNLGAKNCEFAPEQIEKITH
LYLDRVHQPTLPPSEDRELPPPPISKVFDNQDFGFYKVTVERPLRLLAQFTPERVATLRYVPVLAEVMEWAYGEWGDEIY
TSLTDHKQKIEEYLEKEEISLTAKNRKALFTAKTWENQRDLMQVAEQLMASVEQEVWHDFNDFAERVNDTLKTLARQLDS
KLSASEKRQIFNAVSWRDEAAARVIKKVHKLKGEKLAELLEHLGTTEEHLADFGYWPGETAGQWIEYETDSELRDTESVP
LNYGQALERGTAQIHGYFLAEVRPHVEDAWIALDSTKIGYEINFNKYFYQHKPLRKLETVVEEILELEKKTEGLLKRLVS
FGATTDG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 61
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 61
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
AM1_4786 YP_001519075.1 type I restriction-modification system, M subunit VFG1102 Protein 0.0 61